RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	SMDT1	Q9H4I9	107 aa		10.68	□□□□□ -0.7
ABR-223	ENST00000573895	VAX2	Q9UIW0	290 aa		10.68	□□□□□ -0.7
ABR-223	ENST00000573895	RBFOX3	A6NFN3	312 aa		10.67	□□□□□ -0.7
ABR-223	ENST00000573895	NDUFS6	O75380	124 aa	Known RBP	10.67	□□□□□ -0.7
ABR-223	ENST00000573895	RPL11	P62913	178 aa	Known RBP	10.67	□□□□□ -0.7
ABR-223	ENST00000573895	MUC7	Q8TAX7	377 aa		10.67	□□□□□ -0.7
ABR-223	ENST00000573895	FAM210A	Q96ND0	272 aa		10.67	□□□□□ -0.7
ABR-223	ENST00000573895	SLC50A1	Q9BRV3	221 aa		10.67	□□□□□ -0.7
ABR-223	ENST00000573895	EDA2R	Q9HAV5	297 aa		10.67	□□□□□ -0.7
ABR-223	ENST00000573895	NRN1	Q9NPD7	142 aa		10.67	□□□□□ -0.7
ABR-223	ENST00000573895	CSMD3	Q7Z407	3707 aa		10.67	□□□□□ -0.7
ABR-223	ENST00000573895	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	10.66	□□□□□ -0.7
ABR-223	ENST00000573895	TRAV2	A0A0B4J234	112 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	PAGE4	O60829	102 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	PEA15	Q15121	130 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	ARL6IP6	Q8N6S5	226 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	BLNK	Q8WV28	456 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	TCEAL7	Q9BRU2	100 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	EIF5A2	Q9GZV4	153 aa	Known RBP	10.66	□□□□□ -0.7
ABR-223	ENST00000573895	AAMDC	Q9H7C9	122 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	OTOR	Q9NRC9	128 aa		10.66	□□□□□ -0.7
ABR-223	ENST00000573895	FAM74A7	A6NL05	159 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	NDUFB4	O95168	129 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	BCL2	P10415	239 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	RAN	P62826	216 aa	Known RBP	10.65	□□□□□ -0.7
ABR-223	ENST00000573895	ODF3L2	Q3SX64	289 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	ZNF506	Q5JVG8	444 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	CST9LP1	Q5W188	147 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	EIF4E3	Q8N5X7	224 aa	Known RBP	10.65	□□□□□ -0.7
ABR-223	ENST00000573895	C17orf77	Q96MU5	243 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	PRELID1	Q9Y255	219 aa		10.65	□□□□□ -0.7
ABR-223	ENST00000573895	TENM2	Q9NT68	2774 aa		10.65	□□□□□ -0.71
ABR-223	ENST00000573895	LOC102723971	A0A1B0GUV8	181 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895	PGP	A6NDG6	321 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895	DNASE2	O00115	360 aa	Predicted RBP	10.64	□□□□□ -0.71
ABR-223	ENST00000573895	ISLR	O14498	428 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895	ID1	P41134	155 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895	UBE2G2	P60604	165 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895	SUMO1	P63165	101 aa	Known RBP	10.64	□□□□□ -0.71
ABR-223	ENST00000573895	UQCC3	Q6UW78	93 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895	RXFP4	Q8TDU9	374 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895		Q9H3A6	140 aa		10.64	□□□□□ -0.71
ABR-223	ENST00000573895	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.64	□□□□□ -0.71
ABR-223	ENST00000573895		F6UZH7	168 aa		10.63	□□□□□ -0.71
ABR-223	ENST00000573895	UBE2C	O00762	179 aa		10.63	□□□□□ -0.71
ABR-223	ENST00000573895	PDE6D	O43924	150 aa		10.63	□□□□□ -0.71
ABR-223	ENST00000573895	MEF2B	Q02080	365 aa	Predicted RBP	10.63	□□□□□ -0.71
ABR-223	ENST00000573895	MRPL53	Q96EL3	112 aa	Known RBP	10.63	□□□□□ -0.71
ABR-223	ENST00000573895	C16orf92	Q96LL3	132 aa		10.63	□□□□□ -0.71
ABR-223	ENST00000573895	MS4A6A	Q9H2W1	248 aa		10.63	□□□□□ -0.71
ABR-223	ENST00000573895	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.63	□□□□□ -0.71
ABR-223	ENST00000573895	KIR2DL5B	A0A0G2JN68	375 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	KIR2DL5B	A0A0G2JPC4	375 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	C11orf94	C9JXX5	98 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895		H3BTX0	84 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895		K7EQG2	157 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	SNRPC	P09234	159 aa	Known RBP	10.62	□□□□□ -0.71
ABR-223	ENST00000573895	APOC4	P55056	127 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	ICAM4	Q14773	271 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	TOR2A	Q5JU69	321 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	CASC10	Q5T4H9	136 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895		Q6ZWC4	215 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	COMMD7	Q86VX2	200 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	CCDC28A	Q8IWP9	274 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	KIR2DL5A	Q8N109	375 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	KIR2DL5B	Q8NHK3	375 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	CMTM2	Q8TAZ6	248 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	DCANP1	Q8TF63	244 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	RARRES2	Q99969	163 aa		10.62	□□□□□ -0.71
ABR-223	ENST00000573895	SLC17A3	O00476	420 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	SOCS3	O14543	225 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	CSN1S1	P47710	185 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	SNRPD3	P62318	126 aa	Known RBP	10.61	□□□□□ -0.71
ABR-223	ENST00000573895	PSG3	Q16557	428 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	GBGT1	Q8N5D6	347 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	C5orf17	Q8NAS9	161 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	HIST1H2BA	Q96A08	127 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	RPUSD4	Q96CM3	377 aa	Known RBP	10.61	□□□□□ -0.71
ABR-223	ENST00000573895	EPDR1	Q9UM22	224 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	TP53TG1	Q9Y2A0	90 aa		10.61	□□□□□ -0.71
ABR-223	ENST00000573895	IGKV3-7	A0A075B6H7	116 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	TRAV8-2	A0A0B4J237	113 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	SERTM2	A0A1B0GWG4	89 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	GGTLC3	B5MD39	225 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	TMEM250	H0YL14	139 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	SLC25A5	P05141	298 aa	Known RBP	10.6	□□□□□ -0.71
ABR-223	ENST00000573895	WFDC3	Q8IUB2	231 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	EXOC3-AS1	Q8N2X6	119 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	RETN	Q9HD89	108 aa		10.6	□□□□□ -0.71
ABR-223	ENST00000573895	ATP5G3	P48201	142 aa		10.59	□□□□□ -0.71
ABR-223	ENST00000573895	IL17D	Q8TAD2	202 aa		10.59	□□□□□ -0.71
ABR-223	ENST00000573895	OVOL2	Q9BRP0	275 aa		10.59	□□□□□ -0.71
ABR-223	ENST00000573895	SLC35B3	Q9H1N7	401 aa		10.59	□□□□□ -0.71
ABR-223	ENST00000573895	MAP6D1	Q9H9H5	199 aa		10.59	□□□□□ -0.71
ABR-223	ENST00000573895	TREM1	Q9NP99	234 aa		10.59	□□□□□ -0.71
ABR-223	ENST00000573895	FBLL1	A6NHQ2	334 aa	Known RBP	10.58	□□□□□ -0.72
ABR-223	ENST00000573895		K7EQM0	130 aa		10.58	□□□□□ -0.72
ABR-223	ENST00000573895	S100A9	P06702	114 aa	Known RBP	10.58	□□□□□ -0.72
ABR-223	ENST00000573895	SRP19	P09132	144 aa	Known RBP	10.58	□□□□□ -0.72

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