RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ZNF586Q9NXT0 402 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 XCL2Q9UBD3 114 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 PKD1P98161 4303 aa6.23□□□□□ -1.41
SMG6-210ENST00000572205 LOC102723971A0A1B0GUV8 181 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 COX7A2P2O60397 106 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 IGKV3-20P01619 116 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 PYYP10082 97 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 MIFP14174 115 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 FXYD7P58549 80 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 NANOS2P60321 138 aaKnown RBP6.22□□□□□ -1.41
SMG6-210ENST00000572205 SRSF3P84103 164 aaKnown RBP6.22□□□□□ -1.41
SMG6-210ENST00000572205 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
SMG6-210ENST00000572205 C10orf113Q5VZT2 155 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 LCN15Q6UWW0 184 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 OR8A1Q8NGG7 326 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 ATP5SQ99766 215 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 PARD6GQ9BYG4 376 aaPredicted RBP6.22□□□□□ -1.41
SMG6-210ENST00000572205 HRH4Q9H3N8 390 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 DNAJC4Q9NNZ3 241 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 RPRMQ9NS64 109 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 TMEM14CQ9P0S9 112 aa6.22□□□□□ -1.41
SMG6-210ENST00000572205 TRBV19A0A075B6N1 114 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 M0R2Z0 102 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 ZNF253O75346 499 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 RPL12P30050 165 aaKnown RBP6.21□□□□□ -1.42
SMG6-210ENST00000572205 ID1P41134 155 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 PSG9Q00887 426 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 PSG3Q16557 428 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 BPIFA4PQ86YQ2 179 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 BAP18Q8IXM2 172 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 LINC00476Q8WZB0 136 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 FXYD5Q96DB9 178 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 FAM19A4Q96LR4 140 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 AQP10Q96PS8 301 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 PFDN5Q99471 154 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 SLC50A1Q9BRV3 221 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 SLC25A31Q9H0C2 315 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 PKHD1P08F94 4074 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 DNAH11Q96DT5 4516 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 NACAE9PAV3 2078 aa6.21□□□□□ -1.42
SMG6-210ENST00000572205 PGPEP1LA6NFU8 196 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 M0R3E3 92 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 PRM2P04554 102 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 GIPP09681 153 aaPredicted RBP6.2□□□□□ -1.42
SMG6-210ENST00000572205 SPINK13Q1W4C9 94 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 C12orf74Q32Q52 190 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 CEMP1Q6PRD7 247 aaPredicted RBP6.2□□□□□ -1.42
SMG6-210ENST00000572205 Q6ZTC4 211 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 OR4B1Q8NGF8 309 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 OR1L4Q8NGR5 311 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 IGF2BP2-AS1Q96M15 143 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 MFFQ9GZY8 342 aa6.2□□□□□ -1.42
SMG6-210ENST00000572205 NUPR2A6NF83 97 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 NPIPB6E9PJ23 425 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 BOLA2-SMG1P6H3BVE0 249 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 EIF3GO75821 320 aaKnown RBP eCLIP6.19□□□□□ -1.42
SMG6-210ENST00000572205 PLA2G1BP04054 148 aaKnown RBP6.19□□□□□ -1.42
SMG6-210ENST00000572205 PET100P0DJ07 73 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 FGL1Q08830 312 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 RGS21Q2M5E4 152 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 ZNF738Q8NE65 137 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 PHLDA1Q8WV24 401 aaPredicted RBP6.19□□□□□ -1.42
SMG6-210ENST00000572205 RPUSD4Q96CM3 377 aaKnown RBP6.19□□□□□ -1.42
SMG6-210ENST00000572205 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 C1QTNF4Q9BXJ3 329 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 SMIM3Q9BZL3 60 aa6.19□□□□□ -1.42
SMG6-210ENST00000572205 TRAV12-2A0A075B6T6 113 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 RLN2P04090 185 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 HIST1H1EP10412 219 aaKnown RBP6.18□□□□□ -1.42
SMG6-210ENST00000572205 HIST1H1AQ02539 215 aaPredicted RBP6.18□□□□□ -1.42
SMG6-210ENST00000572205 RAB31Q13636 194 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 PDE6HQ13956 83 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 GUK1Q16774 197 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 GAGE13Q4V321 117 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 PRR9Q5T870 116 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 EBLN2Q6P2I7 272 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 Q6ZRG5 221 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 SSX7Q7RTT5 188 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 C11orf45Q8TAV5 145 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 MRPL53Q96EL3 112 aaKnown RBP6.18□□□□□ -1.42
SMG6-210ENST00000572205 MRPL32Q9BYC8 188 aaKnown RBP6.18□□□□□ -1.42
SMG6-210ENST00000572205 DKK2Q9UBU2 259 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 TNFSF18Q9UNG2 199 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 FUT9Q9Y231 359 aa6.18□□□□□ -1.42
SMG6-210ENST00000572205 CXorf65A6NEN9 183 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 DUSP14O95147 198 aaKnown RBP6.17□□□□□ -1.42
SMG6-210ENST00000572205 CT45A10P0DMU9 189 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 AZU1P20160 251 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 S100A7P31151 101 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 RAB2AP61019 212 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 NUTF2P61970 127 aaKnown RBP6.17□□□□□ -1.42
SMG6-210ENST00000572205 GFI1BQ5VTD9 330 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 ZNF767PQ75MW2 155 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 EXOC3-AS1Q8N2X6 119 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 OR2G3Q8NGZ4 309 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 RNASE8Q8TDE3 154 aaKnown RBP6.17□□□□□ -1.42
SMG6-210ENST00000572205 ASB13Q8WXK3 278 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 ODF3Q96PU9 254 aa6.17□□□□□ -1.42
SMG6-210ENST00000572205 MED28Q9H204 178 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms