RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 TCRAP04437 139 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 SNRPCP09234 159 aaKnown RBP8.97□□□□□ -0.97
CDRT1-206ENST00000571263 CNN1P51911 297 aaKnown RBP8.97□□□□□ -0.97
CDRT1-206ENST00000571263 TAS2R60P59551 318 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 KRTAP21-3Q3LHN1 58 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 TMEM61Q8N0U2 210 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 CYB561D1Q8N8Q1 229 aa8.97□□□□□ -0.97
CDRT1-206ENST00000571263 TRAV8-2A0A0B4J237 113 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 TRBV6-1A0A0K0K1D8 114 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 AKR1C3P42330 323 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 SRSF3P84103 164 aaKnown RBP8.96□□□□□ -0.98
CDRT1-206ENST00000571263 PRR31Q5SQ13 230 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 WFDC3Q8IUB2 231 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 GBGT1Q8N5D6 347 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 SMIM12Q96EX1 92 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 FMC1Q96HJ9 113 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 FAM110AQ9BQ89 295 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 SEC11CQ9BY50 192 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 KLF12Q9Y4X4 402 aa8.96□□□□□ -0.98
CDRT1-206ENST00000571263 F8W036 122 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 WIPF1O43516 503 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 SFTA3P0C7M3 94 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 S100A1P23297 94 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 UBE2G1P62253 170 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 GUCA2BQ16661 112 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 TMEM183BQ1AE95 376 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 TMEM75Q8N9X5 138 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 ZNF738Q8NE65 137 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 OR10J6PQ8NGY7 276 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 C2CD4CQ8TF44 421 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 LINC00477Q96M19 166 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 LINC00052Q96N35 136 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 PPP1R14DQ9NXH3 145 aa8.95□□□□□ -0.98
CDRT1-206ENST00000571263 SCO2A0A1W2PP80 73 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 ZNF727A8MUV8 499 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 C9JCJ5 164 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 C9JQL5 133 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 DUSP14O95147 198 aaKnown RBP8.94□□□□□ -0.98
CDRT1-206ENST00000571263 TFPI2P48307 235 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 SAPCD1Q5SSQ6 148 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 EBLN2Q6P2I7 272 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 NIPSNAP3BQ9BS92 247 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 PARLQ9H300 379 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 BIN3Q9NQY0 253 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 ZFP30Q9Y2G7 519 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 LENEPQ9Y5L5 61 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 LY96Q9Y6Y9 160 aa8.94□□□□□ -0.98
CDRT1-206ENST00000571263 TRBV7-9A0A0J9YWB2 115 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 M0R3E3 92 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 RPL35P42766 123 aaKnown RBP8.93□□□□□ -0.98
CDRT1-206ENST00000571263 CEBPGP53567 150 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 PNRC1Q12796 327 aaPredicted RBP8.93□□□□□ -0.98
CDRT1-206ENST00000571263 TMEM241Q24JQ0 296 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 BEAN1Q3B7T3 259 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 C10orf91Q5T1B1 145 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 TMEM78Q5T7P6 136 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 C9orf47Q6ZRZ4 202 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 GOLT1AQ6ZVE7 132 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 RNF182Q8N6D2 247 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 SPATA3Q8NHX4 192 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 SMIM7Q9BQ49 75 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 NDFIP1Q9BT67 221 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 NAT8Q9UHE5 227 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 RPH3ALQ9UNE2 315 aa8.93□□□□□ -0.98
CDRT1-206ENST00000571263 ZNF256Q9Y2P7 627 aaPredicted RBP8.93□□□□□ -0.98
CDRT1-206ENST00000571263 NF1P21359 2839 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 GNG4P50150 75 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 FLI1Q01543 452 aaPredicted RBP8.92□□□□□ -0.98
CDRT1-206ENST00000571263 PSMG4Q5JS54 123 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 IGFL4Q6B9Z1 124 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 FOXI2Q6ZQN5 318 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 OR8A1Q8NGG7 326 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 MDFIQ99750 246 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 PSG8Q9UQ74 426 aa8.92□□□□□ -0.98
CDRT1-206ENST00000571263 JMJD1CQ15652 2540 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 ZNF705FA8MVS1 300 aaPredicted RBP8.91□□□□□ -0.98
CDRT1-206ENST00000571263 OR11H12B2RN74 326 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 ZNF688P0C7X2 276 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 HLA-DMBP28068 263 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 ZNF138P52744 262 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 GNG5P63218 68 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 ZNF674Q2M3X9 581 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 GTSCR1Q86UQ5 136 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 BAGE2Q86Y30 109 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 TVP23CQ96ET8 276 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 CLUHP3Q96NS8 147 aa8.91□□□□□ -0.98
CDRT1-206ENST00000571263 CARHSP1Q9Y2V2 147 aaKnown RBP8.91□□□□□ -0.98
CDRT1-206ENST00000571263 NIPBLQ6KC79 2804 aaeCLIP8.91□□□□□ -0.98
CDRT1-206ENST00000571263 IZUMO1RA6ND01 250 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 B4DEV8 164 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 NPIPB6E9PJ23 425 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 ATP6V1G1O75348 118 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 LTAP01374 205 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 DEFB131AP59861 70 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 SVBPQ8N300 66 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 C20orf173Q96LM9 149 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 ODF3Q96PU9 254 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 SAV1Q9H4B6 383 aaPredicted RBP8.9□□□□□ -0.98
CDRT1-206ENST00000571263 MAP6D1Q9H9H5 199 aa8.9□□□□□ -0.98
CDRT1-206ENST00000571263 A0A0J9YX75 114 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms