RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 DTD1Q8TEA8 209 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 CACNG8Q8WXS5 425 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 TMEM230Q96A57 120 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 GPR146Q96CH1 333 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 B9D2Q9BPU9 175 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 C20orf24Q9BUV8 137 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 TMEM231Q9H6L2 316 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 ZC4H2Q9NQZ6 224 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 NUDT15Q9NV35 164 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 S4R3C0 116 aa2.77□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3-21A0A0B4J1V1 117 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3-35A0A0C4DH35 117 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 C9orf170A2RU37 121 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 LYRM1O43325 122 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 SYNGR2O43760 224 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 TMEM50AO95807 157 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 TCRBP04435 133 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 C8orf88P0DMB2 117 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 RNASE2P10153 161 aaKnown RBP2.76□□□□□ -1.97
NUP88-202ENST00000570937 RAB4AP20338 218 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 NPPCP23582 126 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 NPY1RP25929 384 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 GPX4P36969 197 aaPredicted RBP2.76□□□□□ -1.97
NUP88-202ENST00000570937 NUP62P37198 522 aaPredicted RBP2.76□□□□□ -1.97
NUP88-202ENST00000570937 BCAP31P51572 246 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 MFAP2P55001 183 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 DEFA1P59665 94 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 DEFA3P59666 94 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 CXCL6P80162 114 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 DEFA5Q01523 94 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 DHRS2Q13268 280 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 PPP1R1AQ13522 171 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 BSXQ3C1V8 233 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 SPINK9Q5DT21 86 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 SAPCD1Q5SSQ6 148 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 PVRIGQ6DKI7 326 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 C19orf35Q6ZS72 473 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 S100A7AQ86SG5 101 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 LYG2Q86SG7 212 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.76□□□□□ -1.97
NUP88-202ENST00000570937 OR52B4Q8NGK2 314 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 OR1S2Q8NGQ3 325 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 OR4X1Q8NH49 305 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 Q8WTZ3 238 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 OR10C1Q96KK4 312 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 METTL26Q96S19 204 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 ZNF436Q9C0F3 470 aaPredicted RBP2.76□□□□□ -1.97
NUP88-202ENST00000570937 C20orf85Q9H1P6 137 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 NOTCH1P46531 2555 aa2.76□□□□□ -1.97
NUP88-202ENST00000570937 TNCP24821 2201 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 A0A0G2JRQ6 117 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 IGHV7-4-1A0A0J9YVY3 117 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 TMEM213A2RRL7 107 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 HELTA6NFD8 242 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 OR4C46A6NHA9 309 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 ZFP92A6NM28 416 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 SNRPGP15A8MWD9 76 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 PITX3O75364 302 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 UPK1BO75841 260 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 CFDP00746 253 aaPredicted RBP2.75□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3-48P01763 117 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 RD3LP0DJH9 198 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 PVALBP20472 110 aaPredicted RBP2.75□□□□□ -1.97
NUP88-202ENST00000570937 OR10J1P30954 320 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 RND2P52198 227 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 YPEL3P61236 119 aaPredicted RBP2.75□□□□□ -1.97
NUP88-202ENST00000570937 ASAH1Q13510 395 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 HAGHQ16775 308 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 IAH1Q2TAA2 248 aaPredicted RBP2.75□□□□□ -1.97
NUP88-202ENST00000570937 MAJINQ3KP22 176 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 PRSS54Q6PEW0 395 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 TOMM20LQ6UXN7 152 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 C2orf66Q6UXQ4 117 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 UNQ9165/PRO28630Q6UXU0 137 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 TMEM61Q8N0U2 210 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 MITD1Q8WV92 249 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 ACY3Q96HD9 319 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 SLC35E1Q96K37 410 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 SDHCQ99643 169 aaPredicted RBP2.75□□□□□ -1.97
NUP88-202ENST00000570937 CHRDL1Q9BU40 450 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 RHPN1-AS1Q9BWJ2 59 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 RBKSQ9H477 322 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 GSKIPQ9P0R6 139 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 SMPXQ9UHP9 88 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 STRAPQ9Y3F4 350 aaKnown RBP2.75□□□□□ -1.97
NUP88-202ENST00000570937 U3KQK5 164 aa2.75□□□□□ -1.97
NUP88-202ENST00000570937 TRAV2A0A0B4J234 112 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 C5orf51A6NDU8 294 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 OR11H12B2RN74 326 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 H0Y9J4 135 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 DNASE2O00115 360 aaPredicted RBP2.74□□□□□ -1.97
NUP88-202ENST00000570937 CHEK1O14757 476 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 RTL8CO15255 209 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 PLA2G10O15496 165 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 ZNF207O43670 478 aaKnown RBP2.74□□□□□ -1.97
NUP88-202ENST00000570937 SSSCA1O60232 199 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 RLN2P04090 185 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 BTCP35070 178 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 APOC4P55056 127 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 TAS2R30P59541 319 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms