RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 C11orf94C9JXX5 98 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 F6UZH7 168 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 MRPS12O15235 138 aaKnown RBP4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 PDE6DO43924 150 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF688P0C7X2 276 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 AKR1C3P42330 323 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 CD81P60033 236 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 MEF2BQ02080 365 aaPredicted RBP4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 ICAM4Q14773 271 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 FAM90A2PQ658T7 463 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 RNF182Q8N6D2 247 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 WFDC9Q8NEX5 89 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 RXFP4Q8TDU9 374 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 DCANP1Q8TF63 244 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 FAM210AQ96ND0 272 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 TXNDC17Q9BRA2 123 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF331Q9NQX6 463 aaPredicted RBP4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 VAX2Q9UIW0 290 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 PRELID1Q9Y255 219 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 YTHDF2Q9Y5A9 579 aaKnown RBP4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 SMAD5-AS1Q9Y6J3 95 aa4.95□□□□□ -1.62
CTDNEP1-204ENST00000570484 LOC102723971A0A1B0GUV8 181 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 SERTM2A0A1B0GWG4 89 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 PGPA6NDG6 321 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 RBFOX3A6NFN3 312 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 FAM74A7A6NL05 159 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 GGTLC3B5MD39 225 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 K7EQG2 157 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 ATP5G3P48201 142 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 CNN1P51911 297 aaKnown RBP4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 CEBPGP53567 150 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 CMC4P56277 68 aaPredicted RBP4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 UBE2G1P62253 170 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 CCL20P78556 96 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 PEA15Q15121 130 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 EBLN2Q6P2I7 272 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 COMMD7Q86VX2 200 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 EXOC3-AS1Q8N2X6 119 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 OR10J6PQ8NGY7 276 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 LYPD6BQ8NI32 183 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 SUN5Q8TC36 379 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 RPUSD4Q96CM3 377 aaKnown RBP4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 MRPL53Q96EL3 112 aaKnown RBP4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 C17orf77Q96MU5 243 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 MAP6D1Q9H9H5 199 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 TREM1Q9NP99 234 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF256Q9Y2P7 627 aaPredicted RBP4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 ATRQ13535 2644 aa4.94□□□□□ -1.62
CTDNEP1-204ENST00000570484 SETD2Q9BYW2 2564 aaPredicted RBP4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 RAB19A4D1S5 217 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 IZUMO1RA6ND01 250 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 M0R3E3 92 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 PEX7O00628 323 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 SOCS3O14543 225 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 NDUFB4O95168 129 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 DEFB131AP59861 70 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 GNG5P63218 68 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 HIST1H1AQ02539 215 aaPredicted RBP4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 PMS2P11Q13670 270 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 PSG3Q16557 428 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF506Q5JVG8 444 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 TMEM78Q5T7P6 136 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 IGFL4Q6B9Z1 124 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 GOLT1AQ6ZVE7 132 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 CYB561D1Q8N8Q1 229 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 HIST1H2BAQ96A08 127 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 ATG101Q9BSB4 218 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 NDFIP1Q9BT67 221 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 PPP1R14DQ9NXH3 145 aa4.93□□□□□ -1.62
CTDNEP1-204ENST00000570484 FBN1P35555 2871 aaKnown RBP4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 IGKV2-40A0A087WW87 121 aaPredicted RBP4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 TRAV8-2A0A0B4J237 113 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 FBLL1A6NHQ2 334 aaKnown RBP4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 DUSP14O95147 198 aaKnown RBP4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 IGKV2D-40P01614 121 aaPredicted RBP4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 TCRAP04437 139 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 HLA-DMBP28068 263 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 NDUFA5Q16718 116 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF674Q2M3X9 581 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 ACTL10Q5JWF8 245 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 UQCC3Q6UW78 93 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 FOXI2Q6ZQN5 318 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 STHQ8IWL8 128 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 FAM24BQ8N5W8 94 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 ARL6IP6Q8N6S5 226 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 FMC1Q96HJ9 113 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 SMDT1Q9H4I9 107 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 MED9Q9NWA0 146 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 EPDR1Q9UM22 224 aa4.92□□□□□ -1.62
CTDNEP1-204ENST00000570484 RBAKDNA6NC62 111 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 LINC00862A6NCI5 91 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 ZNF705FA8MVS1 300 aaPredicted RBP4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 DIRC3C9JPN6 131 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 G3V4G9 280 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 TMEM250H0YL14 139 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 S100A9P06702 114 aaKnown RBP4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 CD7P09564 240 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 HLA-DRB4P13762 266 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 BEAN1Q3B7T3 259 aa4.91□□□□□ -1.62
CTDNEP1-204ENST00000570484 ODF3L2Q3SX64 289 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms