RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
RNF40-205ENST00000563909 K7EQG2 157 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 BCL2L11O43521 198 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 PFDN1O60925 122 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 MEOX2P50222 304 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 GCSAMLQ5JQS6 135 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 SAMD13Q5VXD3 122 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 OR2G3Q8NGZ4 309 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 DCANP1Q8TF63 244 aa11.37□□□□□ -0.59
RNF40-205ENST00000563909 MRPL32Q9BYC8 188 aaKnown RBP11.37□□□□□ -0.59
RNF40-205ENST00000563909 MBP02144 154 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 M6PRP20645 277 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 DEFB131AP59861 70 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 EIF5AP63241 154 aaKnown RBP11.36□□□□□ -0.59
RNF40-205ENST00000563909 CD300CQ08708 224 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 LGALSLQ3ZCW2 172 aaPredicted RBP11.36□□□□□ -0.59
RNF40-205ENST00000563909 RNF212Q495C1 297 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 SPATA12Q7Z6I5 190 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 SEPSECSQ9HD40 501 aaKnown RBP11.36□□□□□ -0.59
RNF40-205ENST00000563909 RFNGQ9Y644 331 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 X6R8D5 127 aa11.36□□□□□ -0.59
RNF40-205ENST00000563909 TRAV5A0A0B4J249 113 aa11.35□□□□□ -0.59
RNF40-205ENST00000563909 ZNF705EA8MWA4 302 aaPredicted RBP11.35□□□□□ -0.59
RNF40-205ENST00000563909 ID1P41134 155 aa11.35□□□□□ -0.59
RNF40-205ENST00000563909 SNRPD3P62318 126 aaKnown RBP11.35□□□□□ -0.59
RNF40-205ENST00000563909 RHOBP62745 196 aa11.35□□□□□ -0.59
RNF40-205ENST00000563909 MORN5Q5VZ52 161 aa11.35□□□□□ -0.59
RNF40-205ENST00000563909 STHQ8IWL8 128 aa11.35□□□□□ -0.59
RNF40-205ENST00000563909 ZNF471Q9BX82 626 aaPredicted RBP11.35□□□□□ -0.59
RNF40-205ENST00000563909 FUT9Q9Y231 359 aa11.35□□□□□ -0.59
RNF40-205ENST00000563909 A0A087X0K7 114 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 A0A1W2PPV4 95 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 MRPS12O15235 138 aaKnown RBP11.34□□□□□ -0.59
RNF40-205ENST00000563909 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
RNF40-205ENST00000563909 C4BPBP20851 252 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 MIR17HGQ75NE6 70 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 OR10G4Q8NGN3 311 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 OR10G9Q8NGN4 311 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 OR10G7Q8NGN6 311 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 SH3BGRL3Q9H299 93 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 TMEM14CQ9P0S9 112 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 FAT1Q14517 4588 aa11.34□□□□□ -0.59
RNF40-205ENST00000563909 TAS2R45P59539 299 aa11.33□□□□□ -0.6
RNF40-205ENST00000563909 FAM24BQ8N5W8 94 aa11.33□□□□□ -0.6
RNF40-205ENST00000563909 LRRC20Q8TCA0 184 aa11.33□□□□□ -0.6
RNF40-205ENST00000563909 C16orf92Q96LL3 132 aa11.33□□□□□ -0.6
RNF40-205ENST00000563909 C18orf15Q96N68 181 aa11.33□□□□□ -0.6
RNF40-205ENST00000563909 AGRNO00468 2067 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 ISLRO14498 428 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 SOCS3O14543 225 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 SPP1P10451 314 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 PSMB3P49720 205 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 RAB2AP61019 212 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 GUK1Q16774 197 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 SPATA31B1PQ5VZV4 182 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 SLC25A2Q9BXI2 301 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 OR51M1Q9H341 326 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 FLG2Q5D862 2391 aaPredicted RBP11.32□□□□□ -0.6
RNF40-205ENST00000563909 VPS13BQ7Z7G8 4022 aa11.32□□□□□ -0.6
RNF40-205ENST00000563909 SEC11BP0C7V7 166 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 IGLC2P0DOY2 106 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
RNF40-205ENST00000563909 TPT1P13693 172 aaKnown RBP11.31□□□□□ -0.6
RNF40-205ENST00000563909 KHDC3LQ587J8 217 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 FAM122CQ6P4D5 195 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 LCN15Q6UWW0 184 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 BAP18Q8IXM2 172 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 C9orf62Q8N4C0 152 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 FAM167A-AS1Q96KT0 104 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 C17orf77Q96MU5 243 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 PAXXQ9BUH6 204 aa11.31□□□□□ -0.6
RNF40-205ENST00000563909 ACTR3CQ9C0K3 210 aaPredicted RBP11.31□□□□□ -0.6
RNF40-205ENST00000563909 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
RNF40-205ENST00000563909 MORN3Q6PF18 240 aaPredicted RBP11.3□□□□□ -0.6
RNF40-205ENST00000563909 TRPT1Q86TN4 253 aaKnown RBP11.3□□□□□ -0.6
RNF40-205ENST00000563909 SLC51BQ86UW2 128 aa11.3□□□□□ -0.6
RNF40-205ENST00000563909 STOML3Q8TAV4 291 aa11.3□□□□□ -0.6
RNF40-205ENST00000563909 FAM210BQ96KR6 192 aa11.3□□□□□ -0.6
RNF40-205ENST00000563909 LINC00052Q96N35 136 aa11.3□□□□□ -0.6
RNF40-205ENST00000563909 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
RNF40-205ENST00000563909 CLEC5AQ9NY25 188 aa11.3□□□□□ -0.6
RNF40-205ENST00000563909 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 H3BQ15 152 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 OR7C2O60412 319 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 ZNF253O75346 499 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 PYYP10082 97 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 PQLC2Q6ZP29 291 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
RNF40-205ENST00000563909 SNRPCP09234 159 aaKnown RBP11.28□□□□□ -0.6
RNF40-205ENST00000563909 PDE6HQ13956 83 aa11.28□□□□□ -0.6
RNF40-205ENST00000563909 EIF5AL1Q6IS14 154 aaKnown RBP11.28□□□□□ -0.6
RNF40-205ENST00000563909 SAT2Q96F10 170 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms