RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 TPT1P13693 172 aaKnown RBP7.15□□□□□ -1.26
CLK3-208ENST00000562626 GCHFRP30047 84 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 CNN1P51911 297 aaKnown RBP7.15□□□□□ -1.26
CLK3-208ENST00000562626 ICAM4Q14773 271 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 DEFB135Q30KP9 77 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 STHQ8IWL8 128 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 LRRC20Q8TCA0 184 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 RPUSD4Q96CM3 377 aaKnown RBP7.15□□□□□ -1.26
CLK3-208ENST00000562626 ACTR3CQ9C0K3 210 aaPredicted RBP7.15□□□□□ -1.26
CLK3-208ENST00000562626 CLEC5AQ9NY25 188 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 RNF24Q9Y225 148 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 STAB2Q8WWQ8 2551 aa7.15□□□□□ -1.26
CLK3-208ENST00000562626 ZNF253O75346 499 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 MBP02144 154 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 RANP62826 216 aaKnown RBP7.14□□□□□ -1.27
CLK3-208ENST00000562626 HIST1H1AQ02539 215 aaPredicted RBP7.14□□□□□ -1.27
CLK3-208ENST00000562626 PDE6HQ13956 83 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 KIR3DS1Q14943 382 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 GUK1Q16774 197 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 FAM74A1Q5RGS3 127 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 AKR1C8PQ5T2L2 129 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 OR4B1Q8NGF8 309 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 OR8A1Q8NGG7 326 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 SUN5Q8TC36 379 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 OVOL2Q9BRP0 275 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 Q9H3A6 140 aa7.14□□□□□ -1.27
CLK3-208ENST00000562626 IGKV2-40A0A087WW87 121 aaPredicted RBP7.13□□□□□ -1.27
CLK3-208ENST00000562626 KIR2DL5BA0A0G2JN68 375 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 KIR2DL5BA0A0G2JPC4 375 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 A0A1B0GV50 99 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 MAP1LC3B2A6NCE7 125 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 CA1P00915 261 aaPredicted RBP7.13□□□□□ -1.27
CLK3-208ENST00000562626 IGKV2D-40P01614 121 aaPredicted RBP7.13□□□□□ -1.27
CLK3-208ENST00000562626 TAS2R45P59539 299 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 ERCC8Q13216 396 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 SAMD13Q5VXD3 122 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 PQLC2Q6ZP29 291 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 SLC51BQ86UW2 128 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 KIR2DL5AQ8N109 375 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 CSNK1G2-AS1Q8NCQ2 148 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 KIR2DL5BQ8NHK3 375 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 FAM213BQ8TBF2 198 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 RCHY1Q96PM5 261 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 MAP1LC3BQ9GZQ8 125 aa7.13□□□□□ -1.27
CLK3-208ENST00000562626 YTHDF2Q9Y5A9 579 aaKnown RBP7.13□□□□□ -1.27
CLK3-208ENST00000562626 GGTLC3B5MD39 225 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 M0R2Z0 102 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 CRXO43186 299 aaPredicted RBP7.12□□□□□ -1.27
CLK3-208ENST00000562626 CXorf1O96002 111 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 RBMY1A1P0DJD3 496 aaKnown RBP7.12□□□□□ -1.27
CLK3-208ENST00000562626 RBMY1CP0DJD4 496 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 APOC4P55056 127 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 GNG5P63218 68 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 PSG9Q00887 426 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 RBMY1FQ15415 496 aaKnown RBP7.12□□□□□ -1.27
CLK3-208ENST00000562626 SPINK13Q1W4C9 94 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 EBLN2Q6P2I7 272 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 VGLL1Q99990 258 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 SPATA25Q9BR10 227 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 XCL2Q9UBD3 114 aa7.12□□□□□ -1.27
CLK3-208ENST00000562626 TRAV12-2A0A075B6T6 113 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 PGPA6NDG6 321 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 NPIPB6E9PJ23 425 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 PRM2P04554 102 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 CT45A10P0DMU9 189 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 SULT1A2P50226 295 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 UBE2G2P60604 165 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 CCL20P78556 96 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 ALKAL2Q6UX46 152 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 Q6ZWC4 215 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 IQCF2Q8IXL9 164 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 MBD3L1Q8WWY6 194 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 RNF183Q96D59 192 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 MRPL53Q96EL3 112 aaKnown RBP7.11□□□□□ -1.27
CLK3-208ENST00000562626 CLUHP3Q96NS8 147 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 AGPAT4-IT1Q9H0P7 198 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 U3KQK5 164 aa7.11□□□□□ -1.27
CLK3-208ENST00000562626 UMAD1C9J7I0 102 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 DIRC3C9JPN6 131 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 SPRY2O43597 315 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 NHLRC4P0CG21 123 aaPredicted RBP7.1□□□□□ -1.27
CLK3-208ENST00000562626 EIF5AP63241 154 aaKnown RBP7.1□□□□□ -1.27
CLK3-208ENST00000562626 PRR9Q5T870 116 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 MORN3Q6PF18 240 aaPredicted RBP7.1□□□□□ -1.27
CLK3-208ENST00000562626 Q6ZQT7 251 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 C1orf158Q8N1D5 194 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 Q8TAT8 98 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 SFT2D1Q8WV19 159 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 FAM19A4Q96LR4 140 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 AAMDCQ9H7C9 122 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 OTORQ9NRC9 128 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 RPH3ALQ9UNE2 315 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 PRELID1Q9Y255 219 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 X6R8D5 127 aa7.1□□□□□ -1.27
CLK3-208ENST00000562626 TRAV8-1A0A0A6YYK1 113 aa7.09□□□□□ -1.27
CLK3-208ENST00000562626 FAM74A7A6NL05 159 aa7.09□□□□□ -1.27
CLK3-208ENST00000562626 UBE2CO00762 179 aa7.09□□□□□ -1.27
CLK3-208ENST00000562626 DUSP14O95147 198 aaKnown RBP7.09□□□□□ -1.27
CLK3-208ENST00000562626 C9orf47Q6ZRZ4 202 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms