RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 LCN15Q6UWW0 184 aa12.65□□□□□ -0.38
RPL28-210ENST00000560583 Q6ZR54 194 aa12.65□□□□□ -0.38
RPL28-210ENST00000560583 PPP1R14DQ9NXH3 145 aa12.65□□□□□ -0.38
RPL28-210ENST00000560583 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
RPL28-210ENST00000560583 IGLV2-18A0A075B6J9 118 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 PLAC8L1A1L4L8 177 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 PRSS29PA6NIE9 313 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 ZNF705GA8MUZ8 300 aaPredicted RBP12.64□□□□□ -0.39
RPL28-210ENST00000560583 INSP01308 110 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 THAP6Q8TBB0 222 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 TMEM37Q8WXS4 190 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 TMEM208Q9BTX3 173 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 KCNIP2Q9NS61 270 aa12.64□□□□□ -0.39
RPL28-210ENST00000560583 MRPS12O15235 138 aaKnown RBP12.63□□□□□ -0.39
RPL28-210ENST00000560583 MPC2O95563 127 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 SNRPCP09234 159 aaKnown RBP12.63□□□□□ -0.39
RPL28-210ENST00000560583 PRB4P10163 310 aaPredicted RBP12.63□□□□□ -0.39
RPL28-210ENST00000560583 CXCL2P19875 107 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 CXCL3P19876 107 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 DAD1P61803 113 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 UBE2DNLQ8IWF7 75 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 SLC50A1Q9BRV3 221 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 NPCDR1Q9BY65 106 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 MED28Q9H204 178 aa12.63□□□□□ -0.39
RPL28-210ENST00000560583 TRAV12-2A0A075B6T6 113 aa12.62□□□□□ -0.39
RPL28-210ENST00000560583 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
RPL28-210ENST00000560583 H0YIZ8 118 aa12.62□□□□□ -0.39
RPL28-210ENST00000560583 BOLA2-SMG1P6H3BVE0 249 aa12.62□□□□□ -0.39
RPL28-210ENST00000560583 RHOBP62745 196 aa12.62□□□□□ -0.39
RPL28-210ENST00000560583 HIST1H1AQ02539 215 aaPredicted RBP12.62□□□□□ -0.39
RPL28-210ENST00000560583 IFNA5P01569 189 aa12.61□□□□□ -0.39
RPL28-210ENST00000560583 AZU1P20160 251 aa12.61□□□□□ -0.39
RPL28-210ENST00000560583 PSG3Q16557 428 aa12.61□□□□□ -0.39
RPL28-210ENST00000560583 OR8A1Q8NGG7 326 aa12.61□□□□□ -0.39
RPL28-210ENST00000560583 MBD2Q9UBB5 411 aa12.61□□□□□ -0.39
RPL28-210ENST00000560583 H3BTX0 84 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 RPL12P30050 165 aaKnown RBP12.6□□□□□ -0.39
RPL28-210ENST00000560583 TSPOP30536 169 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 RNF212Q495C1 297 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 MORN5Q5VZ52 161 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 SCGB1C1Q8TD33 95 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 ATP5SQ99766 215 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 SMIM3Q9BZL3 60 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 HSPB11Q9Y547 144 aa12.6□□□□□ -0.39
RPL28-210ENST00000560583 TRAV5A0A0B4J249 113 aa12.59□□□□□ -0.39
RPL28-210ENST00000560583 LYRM9A8MSI8 78 aa12.59□□□□□ -0.39
RPL28-210ENST00000560583 GUK1Q16774 197 aa12.59□□□□□ -0.39
RPL28-210ENST00000560583 CHAC2Q8WUX2 184 aa12.59□□□□□ -0.39
RPL28-210ENST00000560583 RPUSD4Q96CM3 377 aaKnown RBP12.59□□□□□ -0.39
RPL28-210ENST00000560583 WDR61Q9GZS3 305 aaKnown RBP12.59□□□□□ -0.39
RPL28-210ENST00000560583 ZNF331Q9NQX6 463 aaPredicted RBP12.59□□□□□ -0.39
RPL28-210ENST00000560583 RYR1P21817 5038 aa12.59□□□□□ -0.39
RPL28-210ENST00000560583 FCN2Q15485 313 aa12.58□□□□□ -0.4
RPL28-210ENST00000560583 DEFB130BP0DP73 79 aa12.57□□□□□ -0.4
RPL28-210ENST00000560583 DEFB130AP0DP74 79 aa12.57□□□□□ -0.4
RPL28-210ENST00000560583 RGS21Q2M5E4 152 aa12.57□□□□□ -0.4
RPL28-210ENST00000560583 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
RPL28-210ENST00000560583 TIMM9Q9Y5J7 89 aa12.57□□□□□ -0.4
RPL28-210ENST00000560583 SLC17A3O00476 420 aa12.56□□□□□ -0.4
RPL28-210ENST00000560583 IGLC2P0DOY2 106 aa12.56□□□□□ -0.4
RPL28-210ENST00000560583 KIR3DS1Q14943 382 aa12.56□□□□□ -0.4
RPL28-210ENST00000560583 GCSAMLQ5JQS6 135 aa12.56□□□□□ -0.4
RPL28-210ENST00000560583 C15orf53Q8NAA6 179 aa12.56□□□□□ -0.4
RPL28-210ENST00000560583 ABCA13Q86UQ4 5058 aa12.55□□□□□ -0.4
RPL28-210ENST00000560583 H3BQ15 152 aa12.55□□□□□ -0.4
RPL28-210ENST00000560583 TMEM256Q8N2U0 113 aa12.55□□□□□ -0.4
RPL28-210ENST00000560583 BLNKQ8WV28 456 aa12.55□□□□□ -0.4
RPL28-210ENST00000560583 MRPL32Q9BYC8 188 aaKnown RBP12.55□□□□□ -0.4
RPL28-210ENST00000560583 PARD6GQ9BYG4 376 aaPredicted RBP12.55□□□□□ -0.4
RPL28-210ENST00000560583 PRAC2D3DTV9 90 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 HIST1H1EP10412 219 aaKnown RBP12.54□□□□□ -0.4
RPL28-210ENST00000560583 TAS2R60P59551 318 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 FFAR4Q5NUL3 377 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
RPL28-210ENST00000560583 LINC01587Q99440 93 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 AAMDCQ9H7C9 122 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 ZNF586Q9NXT0 402 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 TMEM14CQ9P0S9 112 aa12.54□□□□□ -0.4
RPL28-210ENST00000560583 PYYP10082 97 aa12.53□□□□□ -0.4
RPL28-210ENST00000560583 CDKN1BP46527 198 aa12.53□□□□□ -0.4
RPL28-210ENST00000560583 MIR17HGQ75NE6 70 aa12.53□□□□□ -0.4
RPL28-210ENST00000560583 C16orf74Q96GX8 76 aa12.53□□□□□ -0.4
RPL28-210ENST00000560583 MUC4Q99102 2169 aa12.53□□□□□ -0.4
RPL28-210ENST00000560583 F5H768 121 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 OR7C2O60412 319 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 ZNF253O75346 499 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 FAM3BP58499 235 aaPredicted RBP12.52□□□□□ -0.41
RPL28-210ENST00000560583 ZNF575Q86XF7 245 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 ZNRF2Q8NHG8 242 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 SAT2Q96F10 170 aaPredicted RBP12.52□□□□□ -0.41
RPL28-210ENST00000560583 SLC25A2Q9BXI2 301 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 FUT9Q9Y231 359 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 HSPG2P98160 4391 aa12.52□□□□□ -0.41
RPL28-210ENST00000560583 TRBV19A0A075B6N1 114 aa12.51□□□□□ -0.41
RPL28-210ENST00000560583 ATP5G1P05496 136 aa12.51□□□□□ -0.41
RPL28-210ENST00000560583 GIPP09681 153 aaPredicted RBP12.51□□□□□ -0.41
RPL28-210ENST00000560583 HTN1P15515 57 aa12.51□□□□□ -0.41
RPL28-210ENST00000560583 ATP5G3P48201 142 aa12.51□□□□□ -0.41
RPL28-210ENST00000560583 PDE6HQ13956 83 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms