RNA–Protein interactions for RNA: ENST00000560502.5

LDLR-213, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 509 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-213ENST00000560502 OR2K2Q8NGT1 345 aa10.5□□□□□ -0.73
LDLR-213ENST00000560502 ZNF414Q96IQ9 312 aa10.5□□□□□ -0.73
LDLR-213ENST00000560502 SMIM7Q9BQ49 75 aa10.5□□□□□ -0.73
LDLR-213ENST00000560502 PARLQ9H300 379 aa10.5□□□□□ -0.73
LDLR-213ENST00000560502 TUBA4BQ9H853 241 aa10.5□□□□□ -0.73
LDLR-213ENST00000560502 H3BQ15 152 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 IGLC2P0DOY2 106 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 NPPCP23582 126 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 ARL6IP6Q8N6S5 226 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 HIST1H2BAQ96A08 127 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 TVP23CQ96ET8 276 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 NAT8Q9UHE5 227 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 PRELID1Q9Y255 219 aa10.49□□□□□ -0.73
LDLR-213ENST00000560502 TRBV19A0A075B6N1 114 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 A0A087X0K7 114 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 GGTLC3B5MD39 225 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 PPP5D1E7EU14 171 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 K7EMT4 169 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 MRPS12O15235 138 aaKnown RBP10.48□□□□□ -0.73
LDLR-213ENST00000560502 BMI1P35226 326 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 CEBPGP53567 150 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 RPEL1Q2QD12 228 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 FAM106AQ4KMX7 169 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 GPHB5Q86YW7 130 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 C5orf17Q8NAS9 161 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 OTORQ9NRC9 128 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 LY96Q9Y6Y9 160 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 U3KQE9 123 aa10.48□□□□□ -0.73
LDLR-213ENST00000560502 A0A1W2PS18 150 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 C9JCJ5 164 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 BUB3O43684 328 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 S100A9P06702 114 aaKnown RBP10.47□□□□□ -0.73
LDLR-213ENST00000560502 GALR1P47211 349 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 PSG9Q00887 426 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 TMEM241Q24JQ0 296 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 OR8I2Q8N0Y5 310 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 IL17DQ8TAD2 202 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 GRAMD2BQ96HH9 432 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 FAM110AQ9BQ89 295 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 PEMTQ9UBM1 199 aa10.47□□□□□ -0.73
LDLR-213ENST00000560502 A0A087WWC5 75 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 SCO2A0A1W2PP80 73 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 ZNF785A8K8V0 405 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 M0R036 132 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 NDUFB4O95168 129 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 ATF4P18848 351 aaPredicted RBP10.46□□□□□ -0.73
LDLR-213ENST00000560502 SUMO1P63165 101 aaKnown RBP10.46□□□□□ -0.73
LDLR-213ENST00000560502 CD300EQ496F6 205 aaPredicted RBP10.46□□□□□ -0.73
LDLR-213ENST00000560502 SDF2L1Q9HCN8 221 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 DAZ1Q9NQZ3 744 aaKnown RBP10.46□□□□□ -0.73
LDLR-213ENST00000560502 ZNF586Q9NXT0 402 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 UFC1Q9Y3C8 167 aa10.46□□□□□ -0.73
LDLR-213ENST00000560502 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 RBMY1BA6NDE4 496 aaKnown RBP10.45□□□□□ -0.74
LDLR-213ENST00000560502 RBMY1EA6NEQ0 496 aaKnown RBP10.45□□□□□ -0.74
LDLR-213ENST00000560502 LGALS9O00182 355 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 CD7P09564 240 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 RBMY1DP0C7P1 496 aaKnown RBP10.45□□□□□ -0.74
LDLR-213ENST00000560502 TAS2R60P59551 318 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 C2CD4CQ8TF44 421 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 BLNKQ8WV28 456 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 SMIM12Q96EX1 92 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 SLC50A1Q9BRV3 221 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 ATG101Q9BSB4 218 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 WFDC10AQ9H1F0 79 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 Q9H3A6 140 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 AAMDCQ9H7C9 122 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 CLEC5AQ9NY25 188 aa10.45□□□□□ -0.74
LDLR-213ENST00000560502 IGHV3-35A0A0C4DH35 117 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 A8MWP6 167 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 PEX7O00628 323 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 AKR1C3P42330 323 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 CNN1P51911 297 aaKnown RBP10.44□□□□□ -0.74
LDLR-213ENST00000560502 RANP62826 216 aaKnown RBP10.44□□□□□ -0.74
LDLR-213ENST00000560502 ZNF674Q2M3X9 581 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 SAMD13Q5VXD3 122 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 DEFB125Q8N687 156 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 C20orf24Q9BUV8 137 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 EPDR1Q9UM22 224 aa10.44□□□□□ -0.74
LDLR-213ENST00000560502 C7orf77A4D0Y5 90 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 PGPA6NDG6 321 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 FBLL1A6NHQ2 334 aaKnown RBP10.43□□□□□ -0.74
LDLR-213ENST00000560502 K7EQM0 130 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 SLC25A5P05141 298 aaKnown RBP10.43□□□□□ -0.74
LDLR-213ENST00000560502 EDN2P20800 178 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 DEFB114Q30KQ6 69 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 C16orf54Q6UWD8 224 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 SIGLEC15Q6ZMC9 328 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 CMTM2Q8TAZ6 248 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 GLMPQ8WWB7 406 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 CTDSP1Q9GZU7 261 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 SRD5A3Q9H8P0 318 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 TMEM242Q9NWH2 141 aa10.43□□□□□ -0.74
LDLR-213ENST00000560502 TRBV6-1A0A0K0K1D8 114 aa10.42□□□□□ -0.74
LDLR-213ENST00000560502 HELTA6NFD8 242 aa10.42□□□□□ -0.74
LDLR-213ENST00000560502 C2orf70A6NJV1 201 aa10.42□□□□□ -0.74
LDLR-213ENST00000560502 RPL35P42766 123 aaKnown RBP10.42□□□□□ -0.74
LDLR-213ENST00000560502 ATRAIDQ6UW56 229 aa10.42□□□□□ -0.74
LDLR-213ENST00000560502 UNQ9165/PRO28630Q6UXU0 137 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms