RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 MORN3Q6PF18 240 aaPredicted RBP11.34□□□□□ -0.59
LYSMD2-204ENST00000560491 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
LYSMD2-204ENST00000560491 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
LYSMD2-204ENST00000560491 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
LYSMD2-204ENST00000560491 PHYHIPLQ96FC7 376 aa11.34□□□□□ -0.59
LYSMD2-204ENST00000560491 CLEC5AQ9NY25 188 aa11.34□□□□□ -0.59
LYSMD2-204ENST00000560491 M0R3E3 92 aa11.33□□□□□ -0.6
LYSMD2-204ENST00000560491 HIST1H1AQ02539 215 aaPredicted RBP11.33□□□□□ -0.6
LYSMD2-204ENST00000560491 OR8A1Q8NGG7 326 aa11.33□□□□□ -0.6
LYSMD2-204ENST00000560491 RAB24Q969Q5 203 aa11.33□□□□□ -0.6
LYSMD2-204ENST00000560491 RNF183Q96D59 192 aa11.33□□□□□ -0.6
LYSMD2-204ENST00000560491 SLC35B3Q9H1N7 401 aa11.33□□□□□ -0.6
LYSMD2-204ENST00000560491 ARL14EPLP0DKL9 152 aa11.32□□□□□ -0.6
LYSMD2-204ENST00000560491 PSG9Q00887 426 aa11.32□□□□□ -0.6
LYSMD2-204ENST00000560491 HYLS1Q96M11 299 aa11.32□□□□□ -0.6
LYSMD2-204ENST00000560491 XCL2Q9UBD3 114 aa11.32□□□□□ -0.6
LYSMD2-204ENST00000560491 TP53TG1Q9Y2A0 90 aa11.32□□□□□ -0.6
LYSMD2-204ENST00000560491 A8MTW9 85 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 STAG3L2P0CL84 134 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 STAG3L3P0CL85 134 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 ICAM4Q14773 271 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 AKR1C8PQ5T2L2 129 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 AMTNQ6UX39 209 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 PQLC2Q6ZP29 291 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 CLUHP3Q96NS8 147 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 ACTR3CQ9C0K3 210 aaPredicted RBP11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 AAMDCQ9H7C9 122 aa11.31□□□□□ -0.6
LYSMD2-204ENST00000560491 NUTF2P61970 127 aaKnown RBP11.3□□□□□ -0.6
LYSMD2-204ENST00000560491 RANP62826 216 aaKnown RBP11.3□□□□□ -0.6
LYSMD2-204ENST00000560491 ZFP69Q49AA0 526 aa11.3□□□□□ -0.6
LYSMD2-204ENST00000560491 C9orf62Q8N4C0 152 aa11.3□□□□□ -0.6
LYSMD2-204ENST00000560491 CSNK1G2-AS1Q8NCQ2 148 aa11.3□□□□□ -0.6
LYSMD2-204ENST00000560491 Q9H3A6 140 aa11.3□□□□□ -0.6
LYSMD2-204ENST00000560491 TPT1P13693 172 aaKnown RBP11.29□□□□□ -0.6
LYSMD2-204ENST00000560491 SPINK13Q1W4C9 94 aa11.29□□□□□ -0.6
LYSMD2-204ENST00000560491 BAP18Q8IXM2 172 aa11.29□□□□□ -0.6
LYSMD2-204ENST00000560491 MRPL53Q96EL3 112 aaKnown RBP11.29□□□□□ -0.6
LYSMD2-204ENST00000560491 PRELID1Q9Y255 219 aa11.29□□□□□ -0.6
LYSMD2-204ENST00000560491 STAB2Q8WWQ8 2551 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 DNAH7Q8WXX0 4024 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 CTXND1A0A1B0GTU2 59 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 M0R2Z0 102 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 SEC11BP0C7V7 166 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 GCHFRP30047 84 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 FHITP49789 147 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 OR10J6PQ8NGY7 276 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 OR11H2Q8NH07 326 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 STOML3Q8TAV4 291 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 TMED6Q8WW62 240 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 RARRES2Q99969 163 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 C1QTNF4Q9BXJ3 329 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
LYSMD2-204ENST00000560491 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 BOLA2-SMG1P6H3BVE0 249 aa11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 CXorf1O96002 111 aa11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 NKX2-5P52952 324 aaPredicted RBP11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 FGF8P55075 233 aaPredicted RBP11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 EIF5AP63241 154 aaKnown RBP11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 ERCC8Q13216 396 aa11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 WWC2-AS2Q96NR7 200 aa11.27□□□□□ -0.61
LYSMD2-204ENST00000560491 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
LYSMD2-204ENST00000560491 LYPD1Q8N2G4 141 aa11.26□□□□□ -0.61
LYSMD2-204ENST00000560491 TMPRSS5Q9H3S3 457 aa11.26□□□□□ -0.61
LYSMD2-204ENST00000560491 PPP1R14DQ9NXH3 145 aa11.26□□□□□ -0.61
LYSMD2-204ENST00000560491 X6R8D5 127 aa11.26□□□□□ -0.61
LYSMD2-204ENST00000560491 TRAV12-2A0A075B6T6 113 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 IGHV3OR16-12A0A075B7B8 117 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 A0A0J9YWU9 116 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 CRXO43186 299 aaPredicted RBP11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 CT45A10P0DMU9 189 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 FAM213BQ8TBF2 198 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 SUN5Q8TC36 379 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 OTORQ9NRC9 128 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 RPH3ALQ9UNE2 315 aa11.25□□□□□ -0.61
LYSMD2-204ENST00000560491 PGPA6NDG6 321 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 UMAD1C9J7I0 102 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 KIR3DS1Q14943 382 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 SLC51BQ86UW2 128 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 C1orf158Q8N1D5 194 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 IGF2BP2-AS1Q96M15 143 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 VGLL1Q99990 258 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 AGPAT4-IT1Q9H0P7 198 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 TMEM167BQ9NRX6 74 aa11.24□□□□□ -0.61
LYSMD2-204ENST00000560491 DEFB4AO15263 64 aa11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 INSP01308 110 aa11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 AMBPP02760 352 aa11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 RBMY1A1P0DJD3 496 aaKnown RBP11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 RBMY1CP0DJD4 496 aa11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 CSN1S1P47710 185 aa11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 GNG5P63218 68 aa11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 RBMY1FQ15415 496 aaKnown RBP11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 ZNF705AQ6ZN79 300 aaPredicted RBP11.23□□□□□ -0.61
LYSMD2-204ENST00000560491 Q8NAQ8 132 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms