RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 GNG7O60262 68 aa10.06□□□□□ -0.8
SMAD3-214ENST00000560402 UBE2L3P68036 154 aaKnown RBP10.06□□□□□ -0.8
SMAD3-214ENST00000560402 RELQ04864 619 aaPredicted RBP10.06□□□□□ -0.8
SMAD3-214ENST00000560402 ZNF674Q2M3X9 581 aa10.06□□□□□ -0.8
SMAD3-214ENST00000560402 C15orf54Q8N8G6 183 aa10.06□□□□□ -0.8
SMAD3-214ENST00000560402 RPUSD4Q96CM3 377 aaKnown RBP10.06□□□□□ -0.8
SMAD3-214ENST00000560402 TXN2Q99757 166 aa10.06□□□□□ -0.8
SMAD3-214ENST00000560402 IGKV1D-37A0A075B6S9 117 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 A0A0J9YWU9 116 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 K7EIM0 57 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 EIF3GO75821 320 aaKnown RBP eCLIP10.05□□□□□ -0.8
SMAD3-214ENST00000560402 IGHV3-48P01763 117 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 MT-ND4LP03901 98 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 IGLC1P0CG04 106 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 GATA2P23769 480 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-214ENST00000560402 FCGR2BP31994 310 aaPredicted RBP10.05□□□□□ -0.8
SMAD3-214ENST00000560402 PLP1P60201 277 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 DEFB135Q30KP9 77 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 ODF3L2Q3SX64 289 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 Q56UQ5 140 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 TMEM88Q6PEY1 159 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 OR51G1Q8NGK1 321 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 OR1B1Q8NGR6 318 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 TCEAL7Q9BRU2 100 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 C20orf24Q9BUV8 137 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 CTDSP1Q9GZU7 261 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 DOK5Q9P104 306 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 HIGD1AQ9Y241 93 aa10.05□□□□□ -0.8
SMAD3-214ENST00000560402 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 F8W735 103 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-214ENST00000560402 NUPL2O15504 423 aaKnown RBP10.04□□□□□ -0.8
SMAD3-214ENST00000560402 RD3LP0DJH9 198 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 ORM2P19652 201 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 ADMP35318 185 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 CMC4P56277 68 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-214ENST00000560402 YPEL3P61236 119 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-214ENST00000560402 ZNF90Q03938 601 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 SPATA31B1PQ5VZV4 182 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 LINC00305Q7Z4B0 112 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 Q8WTZ3 238 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 RNF183Q96D59 192 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 CHRDL1Q9BU40 450 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 PAXXQ9BUH6 204 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 PARLQ9H300 379 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 SDF2L1Q9HCN8 221 aa10.04□□□□□ -0.8
SMAD3-214ENST00000560402 KLK5Q9Y337 293 aaPredicted RBP10.04□□□□□ -0.8
SMAD3-214ENST00000560402 IGHV3-21A0A0B4J1V1 117 aa10.03□□□□□ -0.8
SMAD3-214ENST00000560402 TOMM40O96008 361 aa10.03□□□□□ -0.8
SMAD3-214ENST00000560402 ATP5G3P48201 142 aa10.03□□□□□ -0.8
SMAD3-214ENST00000560402 LYZP61626 148 aa10.03□□□□□ -0.8
SMAD3-214ENST00000560402 ADIRFQ15847 76 aa10.03□□□□□ -0.8
SMAD3-214ENST00000560402 CEMP1Q6PRD7 247 aaPredicted RBP10.03□□□□□ -0.8
SMAD3-214ENST00000560402 TMEM37Q8WXS4 190 aa10.03□□□□□ -0.8
SMAD3-214ENST00000560402 OR51M1Q9H341 326 aa10.03□□□□□ -0.8
SMAD3-214ENST00000560402 MRPL36Q9P0J6 103 aaKnown RBP10.03□□□□□ -0.8
SMAD3-214ENST00000560402 IGHV7-4-1A0A0J9YVY3 117 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 LY6G6CO95867 125 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 TIGITQ495A1 244 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 C11orf52Q96A22 123 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 SLC25A2Q9BXI2 301 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 MAP6D1Q9H9H5 199 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 TMEM242Q9NWH2 141 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 SMPXQ9UHP9 88 aa10.02□□□□□ -0.81
SMAD3-214ENST00000560402 PPP1R2P9O14990 202 aa10.01□□□□□ -0.81
SMAD3-214ENST00000560402 CTSGP08311 255 aa10.01□□□□□ -0.81
SMAD3-214ENST00000560402 PSG1P11464 419 aa10.01□□□□□ -0.81
SMAD3-214ENST00000560402 S100PP25815 95 aa10.01□□□□□ -0.81
SMAD3-214ENST00000560402 RHPN1-AS1Q9BWJ2 59 aa10.01□□□□□ -0.81
SMAD3-214ENST00000560402 KMT2AQ03164 3969 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 CHEK1O14757 476 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 ZNF207O43670 478 aaKnown RBP10□□□□□ -0.81
SMAD3-214ENST00000560402 NDUFB4O95168 129 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 OR10J4P0C629 311 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 AKR1C3P42330 323 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 ANAPC16Q96DE5 110 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 RNF125Q96EQ8 232 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 BTF3L4Q96K17 158 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 FAM167A-AS1Q96KT0 104 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 YTHDF2Q9Y5A9 579 aaKnown RBP10□□□□□ -0.81
SMAD3-214ENST00000560402 LY96Q9Y6Y9 160 aa10□□□□□ -0.81
SMAD3-214ENST00000560402 IGHV3OR16-8A0A075B7F1 116 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 C9JCJ5 164 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 H7BYZ3 331 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 IGKV1-17P01599 117 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
SMAD3-214ENST00000560402 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 PATE2Q6UY27 113 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 BPIFA4PQ86YQ2 179 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 C11orf68Q9H3H3 251 aaKnown RBP9.99□□□□□ -0.81
SMAD3-214ENST00000560402 TMEM14CQ9P0S9 112 aa9.99□□□□□ -0.81
SMAD3-214ENST00000560402 SCO2A0A1W2PP80 73 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 IL4P05112 153 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 S100A9P06702 114 aaKnown RBP9.98□□□□□ -0.81
SMAD3-214ENST00000560402 CNN1P51911 297 aaKnown RBP9.98□□□□□ -0.81
SMAD3-214ENST00000560402 RPL23P62829 140 aaKnown RBP9.98□□□□□ -0.81
SMAD3-214ENST00000560402 RNF212Q495C1 297 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 KCNIP4Q6PIL6 250 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 ZNF600Q6ZNG1 722 aa9.98□□□□□ -0.81
SMAD3-214ENST00000560402 HIST1H2BAQ96A08 127 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms