RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 GPR61Q9BZJ8 451 aa7.81□□□□□ -1.16
TPM1-221ENST00000559831 NKX6-2Q9C056 277 aaPredicted RBP7.81□□□□□ -1.16
TPM1-221ENST00000559831 MED9Q9NWA0 146 aa7.81□□□□□ -1.16
TPM1-221ENST00000559831 PRELID1Q9Y255 219 aa7.81□□□□□ -1.16
TPM1-221ENST00000559831 NOTCH3Q9UM47 2321 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 SCO2A0A1W2PP80 73 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 F6UZH7 168 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 DEFB1P60022 68 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 CD81P60033 236 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 OXLD1Q5BKU9 147 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 RPUSD4Q96CM3 377 aaKnown RBP7.8□□□□□ -1.16
TPM1-221ENST00000559831 TXNDC17Q9BRA2 123 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 CLEC5AQ9NY25 188 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 EPDR1Q9UM22 224 aa7.8□□□□□ -1.16
TPM1-221ENST00000559831 ZNF256Q9Y2P7 627 aaPredicted RBP7.8□□□□□ -1.16
TPM1-221ENST00000559831 IGKV2-40A0A087WW87 121 aaPredicted RBP7.79□□□□□ -1.16
TPM1-221ENST00000559831 DIRC3C9JPN6 131 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 PRAC2D3DTV9 90 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 PEX7O00628 323 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 PDE6DO43924 150 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 IGKV2D-40P01614 121 aaPredicted RBP7.79□□□□□ -1.16
TPM1-221ENST00000559831 SRP19P09132 144 aaKnown RBP7.79□□□□□ -1.16
TPM1-221ENST00000559831 AKR1C3P42330 323 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 DEFB131AP59861 70 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 GOLT1AQ6ZVE7 132 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 CCDC28AQ8IWP9 274 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 SLC7A5P1Q8MH63 180 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 MRPL53Q96EL3 112 aaKnown RBP7.79□□□□□ -1.16
TPM1-221ENST00000559831 MAP6D1Q9H9H5 199 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 AGRNO00468 2067 aa7.79□□□□□ -1.16
TPM1-221ENST00000559831 OR11H12B2RN74 326 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 C9JQL5 133 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 F6UB75 175 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 TCRAP04437 139 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 CD7P09564 240 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 NDUFA5Q16718 116 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 BEAN1Q3B7T3 259 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 CYB561D1Q8N8Q1 229 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 HIST1H2BAQ96A08 127 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 CITED4Q96RK1 184 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 TCEAL7Q9BRU2 100 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 ATG101Q9BSB4 218 aa7.78□□□□□ -1.16
TPM1-221ENST00000559831 TRAV34A0A0B4J273 112 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 KNCNA6PVL3 124 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 K7EQM0 130 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 ZNF705DP0CH99 300 aaPredicted RBP7.77□□□□□ -1.17
TPM1-221ENST00000559831 ZNF705BP0CI00 300 aaPredicted RBP7.77□□□□□ -1.17
TPM1-221ENST00000559831 CNN1P51911 297 aaKnown RBP7.77□□□□□ -1.17
TPM1-221ENST00000559831 HIST1H1AQ02539 215 aaPredicted RBP7.77□□□□□ -1.17
TPM1-221ENST00000559831 ZNF124Q15973 351 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 ZNF674Q2M3X9 581 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 ODF3L2Q3SX64 289 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 UQCC3Q6UW78 93 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 GTSCR1Q86UQ5 136 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 OR10J6PQ8NGY7 276 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 C11orf52Q96A22 123 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 SGK494Q96LW2 274 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 LINC00479Q96M42 142 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 SMDT1Q9H4I9 107 aa7.77□□□□□ -1.17
TPM1-221ENST00000559831 VWFP04275 2813 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 TRAV8-1A0A0A6YYK1 113 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 G3V4G9 280 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 TMEM250H0YL14 139 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 WIPF1O43516 503 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 SFTA3P0C7M3 94 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 CMC4P56277 68 aaPredicted RBP7.76□□□□□ -1.17
TPM1-221ENST00000559831 UBE2G1P62253 170 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 ERCC8Q13216 396 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 ACTL10Q5JWF8 245 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 GDF5OSQ5U4N7 250 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 EBLN2Q6P2I7 272 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 EIF4E3Q8N5X7 224 aaKnown RBP7.76□□□□□ -1.17
TPM1-221ENST00000559831 OR8A1Q8NGG7 326 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 PRR25Q96S07 402 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 ASCL2Q99929 193 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 VGLL1Q99990 258 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 DERL1Q9BUN8 251 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 WFDC10AQ9H1F0 79 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 SLC35B3Q9H1N7 401 aa7.76□□□□□ -1.17
TPM1-221ENST00000559831 DNHD1Q96M86 4753 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 SERTM2A0A1B0GWG4 89 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 IGKV3-20P01619 116 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 RPL35P42766 123 aaKnown RBP7.75□□□□□ -1.17
TPM1-221ENST00000559831 KRTAP10-11P60412 298 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 TMEM78Q5T7P6 136 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 SAMD5Q5TGI4 173 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 FOXI2Q6ZQN5 318 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 PRNTQ86SH4 94 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 ARL6IP6Q8N6S5 226 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 TMEM75Q8N9X5 138 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 OR4B1Q8NGF8 309 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 Q8TAT8 98 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 C2CD4CQ8TF44 421 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 PARLQ9H300 379 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 SAV1Q9H4B6 383 aaPredicted RBP7.75□□□□□ -1.17
TPM1-221ENST00000559831 PSG8Q9UQ74 426 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 TRRAPQ9Y4A5 3859 aa7.75□□□□□ -1.17
TPM1-221ENST00000559831 A0A0J9YX75 114 aa7.74□□□□□ -1.17
TPM1-221ENST00000559831 RBAKDNA6NC62 111 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms