RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 MDFIQ99750 246 aa11.17□□□□□ -0.62
VPS18-202ENST00000558474 ATG101Q9BSB4 218 aa11.17□□□□□ -0.62
VPS18-202ENST00000558474 RBAKDNA6NC62 111 aa11.16□□□□□ -0.62
VPS18-202ENST00000558474 PEX7O00628 323 aa11.16□□□□□ -0.62
VPS18-202ENST00000558474 TCRAP04437 139 aa11.16□□□□□ -0.62
VPS18-202ENST00000558474 FAM74A3Q4VXF1 159 aa11.16□□□□□ -0.62
VPS18-202ENST00000558474 PRR31Q5SQ13 230 aa11.16□□□□□ -0.62
VPS18-202ENST00000558474 GBGT1Q8N5D6 347 aa11.16□□□□□ -0.62
VPS18-202ENST00000558474 FAM110AQ9BQ89 295 aa11.16□□□□□ -0.62
VPS18-202ENST00000558474 IGKV3-7A0A075B6H7 116 aa11.15□□□□□ -0.62
VPS18-202ENST00000558474 TMEM218A2RU14 115 aa11.15□□□□□ -0.62
VPS18-202ENST00000558474 DIRC3C9JPN6 131 aa11.15□□□□□ -0.62
VPS18-202ENST00000558474 SLC7A5P1Q8MH63 180 aa11.15□□□□□ -0.62
VPS18-202ENST00000558474 CYB561D1Q8N8Q1 229 aa11.15□□□□□ -0.62
VPS18-202ENST00000558474 ZNF256Q9Y2P7 627 aaPredicted RBP11.15□□□□□ -0.62
VPS18-202ENST00000558474 TRBV6-1A0A0K0K1D8 114 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 SCO2A0A1W2PP80 73 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 C9JQL5 133 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 TAS2R60P59551 318 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 WFDC3Q8IUB2 231 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 C2CD4CQ8TF44 421 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 CITED4Q96RK1 184 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 ZMAT5Q9UDW3 170 aaKnown RBP11.14□□□□□ -0.63
VPS18-202ENST00000558474 KLF12Q9Y4X4 402 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 WNK1Q9H4A3 2382 aa11.14□□□□□ -0.63
VPS18-202ENST00000558474 KRBOX1C9JBD0 128 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 M0R3E3 92 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 SFTA3P0C7M3 94 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 AKR1C3P42330 323 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 CNN1P51911 297 aaKnown RBP11.13□□□□□ -0.63
VPS18-202ENST00000558474 BEAN1Q3B7T3 259 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 TMEM75Q8N9X5 138 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 ZNF738Q8NE65 137 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 SPATA3Q8NHX4 192 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
VPS18-202ENST00000558474 IZUMO1RA6ND01 250 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 HLA-DMBP28068 263 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 TFPI2P48307 235 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 GUCA2BQ16661 112 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 TMEM183BQ1AE95 376 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 IGFL4Q6B9Z1 124 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 SMIM12Q96EX1 92 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 C20orf173Q96LM9 149 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 LINC00052Q96N35 136 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 SEC11CQ9BY50 192 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 PPP1R14DQ9NXH3 145 aa11.12□□□□□ -0.63
VPS18-202ENST00000558474 C9JCJ5 164 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 ZNF688P0C7X2 276 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 UBE2G1P62253 170 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 GNG5P63218 68 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 PSMG4Q5JS54 123 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 C10orf91Q5T1B1 145 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 C9orf47Q6ZRZ4 202 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 GOLT1AQ6ZVE7 132 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 OR10J6PQ8NGY7 276 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 PARLQ9H300 379 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 SELENOKQ9Y6D0 94 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 LY96Q9Y6Y9 160 aa11.11□□□□□ -0.63
VPS18-202ENST00000558474 ZNF705FA8MVS1 300 aaPredicted RBP11.1□□□□□ -0.63
VPS18-202ENST00000558474 IGLL1P15814 213 aa11.1□□□□□ -0.63
VPS18-202ENST00000558474 RPL35P42766 123 aaKnown RBP11.1□□□□□ -0.63
VPS18-202ENST00000558474 FOXI2Q6ZQN5 318 aa11.1□□□□□ -0.63
VPS18-202ENST00000558474 FAM24BQ8N5W8 94 aa11.1□□□□□ -0.63
VPS18-202ENST00000558474 LINC00477Q96M19 166 aa11.1□□□□□ -0.63
VPS18-202ENST00000558474 RPH3ALQ9UNE2 315 aa11.1□□□□□ -0.63
VPS18-202ENST00000558474 LENEPQ9Y5L5 61 aa11.1□□□□□ -0.63
VPS18-202ENST00000558474 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
VPS18-202ENST00000558474 TRBV7-9A0A0J9YWB2 115 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 ZNF727A8MUV8 499 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 NPIPB6E9PJ23 425 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 F8W036 122 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
VPS18-202ENST00000558474 CEBPGP53567 150 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 FLI1Q01543 452 aaPredicted RBP11.09□□□□□ -0.63
VPS18-202ENST00000558474 TMEM78Q5T7P6 136 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 OR8A1Q8NGG7 326 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 SMIM7Q9BQ49 75 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 NIPSNAP3BQ9BS92 247 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 SAV1Q9H4B6 383 aaPredicted RBP11.09□□□□□ -0.63
VPS18-202ENST00000558474 MAP6D1Q9H9H5 199 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 ZFP30Q9Y2G7 519 aa11.09□□□□□ -0.63
VPS18-202ENST00000558474 A0A0J9YX75 114 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 OR11H12B2RN74 326 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 PRAC2D3DTV9 90 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 LTAP01374 205 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 IGLV2-11P01706 119 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 DEFB131AP59861 70 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 SAPCD1Q5SSQ6 148 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 CLUHP3Q96NS8 147 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 ODF3Q96PU9 254 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 NAT8Q9UHE5 227 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 PSG8Q9UQ74 426 aa11.08□□□□□ -0.64
VPS18-202ENST00000558474 CARHSP1Q9Y2V2 147 aaKnown RBP11.08□□□□□ -0.64
VPS18-202ENST00000558474 IGKV2-40A0A087WW87 121 aaPredicted RBP11.07□□□□□ -0.64
VPS18-202ENST00000558474 IGKV2D-40P01614 121 aaPredicted RBP11.07□□□□□ -0.64
VPS18-202ENST00000558474 GNG4P50150 75 aa11.07□□□□□ -0.64
VPS18-202ENST00000558474 PNRC1Q12796 327 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms