RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 AIPO00170 330 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 DHRS3O75911 302 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 S1PR2O95136 353 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 MOSP00540 346 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 NRASP01111 189 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 CCL1P22362 96 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 ZNF93P35789 620 aaPredicted RBP3.63□□□□□ -1.83
RTF1-204ENST00000558117 ZNF138P52744 262 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 IFITM3Q01628 133 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 PRDX4Q13162 271 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 EDDM3AQ14507 147 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 ZNF846Q147U1 533 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 GLT8D1Q68CQ7 371 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 GLIPR1L1Q6UWM5 242 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 HSD17B13Q7Z5P4 300 aaPredicted RBP3.63□□□□□ -1.83
RTF1-204ENST00000558117 TNFAIP8L1Q8WVP5 186 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 AQP3Q92482 292 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 AP3S1Q92572 193 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 RPUSD4Q96CM3 377 aaKnown RBP3.63□□□□□ -1.83
RTF1-204ENST00000558117 MRAP2Q96G30 205 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 ARL6Q9H0F7 186 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 ATG5Q9H1Y0 275 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 C12orf4Q9NQ89 552 aa3.63□□□□□ -1.83
RTF1-204ENST00000558117 SPANXB1Q9NS25 103 aaPredicted RBP3.63□□□□□ -1.83
RTF1-204ENST00000558117 A0A0J9YXV3 536 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 A0A1B0GVG6 124 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 TINCRA0A1B0GVN0 87 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 MEIS3P1A6NDR6 274 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 C2orf70A6NJV1 201 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 J3QT63 122 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 IGLV3-1P01715 115 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 HLA-DRB1P01911 266 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 RLN2P04090 185 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 CEACAM6P40199 344 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 BAXQ07812 192 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 ZNF816Q0VGE8 651 aaPredicted RBP3.62□□□□□ -1.83
RTF1-204ENST00000558117 KISS1Q15726 138 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 THOC7Q6I9Y2 204 aaKnown RBP3.62□□□□□ -1.83
RTF1-204ENST00000558117 TCTEX1D1Q8N7M0 179 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 OR10G9Q8NGN4 311 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 OR4S2Q8NH73 311 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 C7orf33Q8WU49 177 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 S100ZQ8WXG8 99 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 ACOT12Q8WYK0 555 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 IL22RA2Q969J5 263 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 HMG20AQ9NP66 347 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 TMEM138Q9NPI0 162 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 ABRACLQ9P1F3 81 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 AMMECR1Q9Y4X0 333 aaPredicted RBP3.62□□□□□ -1.83
RTF1-204ENST00000558117 MPC1Q9Y5U8 109 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 NUBP2Q9Y5Y2 271 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 V9GYH0 126 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 USH2AO75445 5202 aa3.62□□□□□ -1.83
RTF1-204ENST00000558117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.61□□□□□ -1.83
RTF1-204ENST00000558117 IGKV1-12A0A0C4DH73 117 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 PQLC2LA1A4F0 135 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 SOCS1O15524 211 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 IGKV1D-12P01611 117 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 TRGV3P03979 118 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 CFL1P23528 166 aaKnown RBP3.61□□□□□ -1.83
RTF1-204ENST00000558117 GABRR1P24046 479 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 TALDO1P37837 337 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 REG1BP48304 166 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 PSMD7P51665 324 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 TAS2R20P59543 309 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 ARFRP1Q13795 201 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 RSU1Q15404 277 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 CDNFQ49AH0 187 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 SMUG1Q53HV7 270 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 UBE2NLQ5JXB2 153 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 ZNF493Q6ZR52 646 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 SLC25A26Q70HW3 274 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 OR11H7Q8NGC8 314 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 OR51T1Q8NGJ9 327 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 PP6455Q8WZ26 134 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 BORCS5Q969J3 196 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 MARC2Q969Z3 335 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 BORCS8Q96FH0 119 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 S100A16Q96FQ6 103 aaKnown RBP3.61□□□□□ -1.83
RTF1-204ENST00000558117 PACRGQ96M98 296 aaPredicted RBP3.61□□□□□ -1.83
RTF1-204ENST00000558117 S100A13Q99584 98 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 CHST5Q9GZS9 411 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 PARP12Q9H0J9 701 aaKnown RBP3.61□□□□□ -1.83
RTF1-204ENST00000558117 METTL9Q9H1A3 318 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 HES4Q9HCC6 221 aa3.61□□□□□ -1.83
RTF1-204ENST00000558117 PEX7O00628 323 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 ZNF861PO60384 105 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 NOS1APO75052 506 aaPredicted RBP3.6□□□□□ -1.83
RTF1-204ENST00000558117 SLC22A5O76082 557 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 IGHV3-7P01780 117 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 HLA-DQB1P01920 261 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 MT-ND4P03905 459 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 TCRBP04435 133 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 IL7P13232 177 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 MIFP14174 115 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 TSPOP30536 169 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 RBP2P50120 134 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 QRFPP83859 136 aa3.6□□□□□ -1.83
RTF1-204ENST00000558117 C4orf26Q17RF5 130 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms