RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 SLC45A2Q9UMX9 530 aa6.72□□□□□ -1.33
SYNE2-224ENST00000557024 DEFB131BA0A096LNP1 70 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 A0A1W2PPV4 95 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 HYPMO75409 117 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 SEC11BP0C7V7 166 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 NPPCP23582 126 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 TOMM20LQ6UXN7 152 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 TMEM182Q6ZP80 229 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-224ENST00000557024 GBGT1Q8N5D6 347 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 RNF2Q99496 336 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 NDUFAF3Q9BU61 184 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 DNAJC4Q9NNZ3 241 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 RNF24Q9Y225 148 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 HIGD1AQ9Y241 93 aa6.71□□□□□ -1.34
SYNE2-224ENST00000557024 DMBT1Q9UGM3 2413 aaPredicted RBP6.71□□□□□ -1.34
SYNE2-224ENST00000557024 IGHV3-49A0A0A0MS15 119 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 A0A1W2PS18 150 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 SPP1P10451 314 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 M6PRP20645 277 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 CMC4P56277 68 aaPredicted RBP6.7□□□□□ -1.34
SYNE2-224ENST00000557024 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 C10orf113Q5VZT2 155 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 UBE2DNLQ8IWF7 75 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 TMED6Q8WW62 240 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 GRAMD2BQ96HH9 432 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 SH3BGRL3Q9H299 93 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 ARV1Q9H2C2 271 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 TMEM231Q9H6L2 316 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 CELA1Q9UNI1 258 aa6.7□□□□□ -1.34
SYNE2-224ENST00000557024 UMAD1C9J7I0 102 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 K7EMT4 169 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 IFNA7P01567 189 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 PLA2G1BP04054 148 aaKnown RBP6.69□□□□□ -1.34
SYNE2-224ENST00000557024 MIFP14174 115 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 TAS2R45P59539 299 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 PLP1P60201 277 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 RHOBP62745 196 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 TMEM41BQ5BJD5 291 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 FAM78BQ5VT40 261 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 LEMD1Q68G75 181 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 FAM122CQ6P4D5 195 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 OR10G4Q8NGN3 311 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 OR10G9Q8NGN4 311 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 OR10G7Q8NGN6 311 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 PHYHIPLQ96FC7 376 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 RHPN1-AS1Q9BWJ2 59 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 ACTR3CQ9C0K3 210 aaPredicted RBP6.69□□□□□ -1.34
SYNE2-224ENST00000557024 SMPXQ9UHP9 88 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 RFNGQ9Y644 331 aa6.69□□□□□ -1.34
SYNE2-224ENST00000557024 CHEK1O14757 476 aa6.68□□□□□ -1.34
SYNE2-224ENST00000557024 GIG44P09565 113 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-224ENST00000557024 CDC34P49427 236 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-224ENST00000557024 RAB5CP51148 216 aa6.68□□□□□ -1.34
SYNE2-224ENST00000557024 RAB2AP61019 212 aa6.68□□□□□ -1.34
SYNE2-224ENST00000557024 USF2Q15853 346 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-224ENST00000557024 C12orf74Q32Q52 190 aa6.68□□□□□ -1.34
SYNE2-224ENST00000557024 ALKAL2Q6UX46 152 aa6.68□□□□□ -1.34
SYNE2-224ENST00000557024 LINC00305Q7Z4B0 112 aa6.68□□□□□ -1.34
SYNE2-224ENST00000557024 MRPL32Q9BYC8 188 aaKnown RBP6.68□□□□□ -1.34
SYNE2-224ENST00000557024 SLC25A39Q9BZJ4 359 aaPredicted RBP6.68□□□□□ -1.34
SYNE2-224ENST00000557024 SLC25A22Q9H936 323 aa6.68□□□□□ -1.34
SYNE2-224ENST00000557024 IGHV3OR16-13A0A075B7E8 117 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 IGHV3-74A0A0B4J1X5 117 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 IGHV3-66A0A0C4DH42 116 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 IGHV7-4-1A0A0J9YVY3 117 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 H3BRN7 92 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 TEX46H3BTG2 121 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 CRYBB3P26998 211 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 SULT1A2P50226 295 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 DEFB131AP59861 70 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 GCSAMLQ5JQS6 135 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 PATE2Q6UY27 113 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 DPPA3Q6W0C5 159 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 STHQ8IWL8 128 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 OR8I2Q8N0Y5 310 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 FAM213BQ8TBF2 198 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 LRRC20Q8TCA0 184 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 TMEM37Q8WXS4 190 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 UHRF2Q96PU4 802 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 VSIRQ9H7M9 311 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 RPRMQ9NS64 109 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 FUT9Q9Y231 359 aa6.67□□□□□ -1.34
SYNE2-224ENST00000557024 CTXND1A0A1B0GTU2 59 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 ZNF98A6NK75 572 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 ZNF705EA8MWA4 302 aaPredicted RBP6.66□□□□□ -1.34
SYNE2-224ENST00000557024 OR7C2O60412 319 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 GALR1P47211 349 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 BLOC1S1P78537 153 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 KHDC3LQ587J8 217 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 FAM74A1Q5RGS3 127 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 FAM90A2PQ658T7 463 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 TEX261Q6UWH6 196 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 BPIFA4PQ86YQ2 179 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 IQCF2Q8IXL9 164 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 FAM24BQ8N5W8 94 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 SHANK2-AS3Q9BTD1 123 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 CLEC5AQ9NY25 188 aa6.66□□□□□ -1.34
SYNE2-224ENST00000557024 HELTA6NFD8 242 aa6.65□□□□□ -1.34
SYNE2-224ENST00000557024 HBE1P02100 147 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms