RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 DEFA3P59666 94 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 HIST1H1AQ02539 215 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-222ENST00000556768 BAXQ07812 192 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 ASAH1Q13510 395 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 IGFL4Q6B9Z1 124 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 NRARPQ7Z6K4 114 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 RNF182Q8N6D2 247 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 SLC50A1Q9BRV3 221 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 NIPSNAP3BQ9BS92 247 aa5.27□□□□□ -1.57
SCFD1-222ENST00000556768 LYRM2Q9NU23 88 aaPredicted RBP5.27□□□□□ -1.57
SCFD1-222ENST00000556768 ALMS1Q8TCU4 4167 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 A0A087X0K7 114 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 FAM24AA6NFZ4 105 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 PRAF2O60831 178 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 MPDU1O75352 247 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 UPK1BO75841 260 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 P0DMU3 169 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 FAM231AP0DMU4 169 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 FAM231CP0DMU5 169 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 CXCL3P19876 107 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 PSG3Q16557 428 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 GUK1Q16774 197 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 C12orf74Q32Q52 190 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 OR8A1Q8NGG7 326 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 OR10J6PQ8NGY7 276 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 RPUSD4Q96CM3 377 aaKnown RBP5.26□□□□□ -1.57
SCFD1-222ENST00000556768 FAM210BQ96KR6 192 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 C20orf173Q96LM9 149 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 SLC25A31Q9H0C2 315 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 PXMP4Q9Y6I8 212 aa5.26□□□□□ -1.57
SCFD1-222ENST00000556768 GAGE12BA1L429 117 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 GAGE12HA6NDE8 117 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 M0R2Z0 102 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 HTN1P15515 57 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 TSPOP30536 169 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 RPL29P47914 159 aaKnown RBP5.25□□□□□ -1.57
SCFD1-222ENST00000556768 DAD1P61803 113 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 ARL16Q0P5N6 197 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 SPINK13Q1W4C9 94 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 FAM222AQ5U5X8 452 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 PATE2Q6UY27 113 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 ZNF767PQ75MW2 155 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 TMEM256Q8N2U0 113 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 TMEM252Q8N6L7 170 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 OR11H7Q8NGC8 314 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 LINC01587Q99440 93 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 MGST2Q99735 147 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 PTTG2Q9NZH5 202 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 DKK2Q9UBU2 259 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 APLNQ9ULZ1 77 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 CELA1Q9UNI1 258 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 EPPK1P58107 5090 aaKnown RBP5.25□□□□□ -1.57
SCFD1-222ENST00000556768 TRAV8-2A0A0B4J237 113 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 UBE2L5PA0A1B0GUS4 154 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 E5RGE8 158 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 INMT-MINDY4F8WBC2 141 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 BOLA2-SMG1P6H3BVE0 249 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 PET100P0DJ07 73 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 HTN3P15516 51 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 CDKN1BP46527 198 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 C1orf158Q8N1D5 194 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 RPP25LQ8N5L8 163 aaKnown RBP5.25□□□□□ -1.57
SCFD1-222ENST00000556768 TMEM37Q8WXS4 190 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 NMES1Q9C002 83 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 ZNF331Q9NQX6 463 aaPredicted RBP5.25□□□□□ -1.57
SCFD1-222ENST00000556768 SLC39A9Q9NUM3 307 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 WDR83OSQ9Y284 106 aa5.25□□□□□ -1.57
SCFD1-222ENST00000556768 YTHDF2Q9Y5A9 579 aaKnown RBP5.25□□□□□ -1.57
SCFD1-222ENST00000556768 A8MTW9 85 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 PRYO14603 147 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 SSNA1O43805 119 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 FGF7P21781 194 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 OXA1LQ15070 435 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 LRRC37A5PQ49AS3 106 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 SERTAD4-AS1Q5TG53 156 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 MIC13Q5XKP0 118 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 AMTNQ6UX39 209 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 C17orf77Q96MU5 243 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 BATF3Q9NR55 127 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 KCNIP2Q9NS61 270 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 TIMM9Q9Y5J7 89 aa5.24□□□□□ -1.57
SCFD1-222ENST00000556768 AGRNO00468 2067 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 TRAV12-2A0A075B6T6 113 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 LYRM9A8MSI8 78 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 SNRPCP09234 159 aaKnown RBP5.23□□□□□ -1.57
SCFD1-222ENST00000556768 TAS2R60P59551 318 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 OPCMLQ14982 345 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 VWC2Q2TAL6 325 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 Q6ZSN1 163 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 UBE2DNLQ8IWF7 75 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 BAP18Q8IXM2 172 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 OR5C1Q8NGR4 320 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 AAMDCQ9H7C9 122 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 IGSF23A1L1A6 192 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 ZNF705GA8MUZ8 300 aaPredicted RBP5.23□□□□□ -1.57
SCFD1-222ENST00000556768 C17orf112F2Z3M2 114 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 H7BYZ3 331 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 DEFB130BP0DP73 79 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 DEFB130AP0DP74 79 aa5.23□□□□□ -1.57
SCFD1-222ENST00000556768 LINC00310P59036 64 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms