RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MRPL32Q9BYC8 188 aaKnown RBP3.9□□□□□ -1.79
SRP54-211ENST00000556445 METTL1Q9UBP6 276 aaKnown RBP3.9□□□□□ -1.79
SRP54-211ENST00000556445 SIGLEC9Q9Y336 463 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 PXMP4Q9Y6I8 212 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 CACNA1AO00555 2505 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 NBASA2RRP1 2371 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 MYO15AQ9UKN7 3530 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 TNCP24821 2201 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 A0A087WWC5 75 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 A0A1B0GV50 99 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 A0A1B0GV72 72 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 A0A1W2PPR1 153 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 A0A1W2PS18 150 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 E9PLD3 99 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 C19orf84I3L1E1 186 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 DNASE2O00115 360 aaPredicted RBP3.89□□□□□ -1.79
SRP54-211ENST00000556445 NDUFA3O95167 84 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 SNRPCP09234 159 aaKnown RBP3.89□□□□□ -1.79
SRP54-211ENST00000556445 OR13C7P0DN81 318 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 S100A7P31151 101 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 CCL20P78556 96 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 EBI3Q14213 229 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 MMDQ15546 238 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 GUCA2BQ16661 112 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 KLF17Q5JT82 389 aaPredicted RBP3.89□□□□□ -1.79
SRP54-211ENST00000556445 MIC13Q5XKP0 118 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.89□□□□□ -1.79
SRP54-211ENST00000556445 SLC16A13Q7RTY0 426 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 VMO1Q7Z5L0 202 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 NIT1Q86X76 327 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 CIARTQ8N365 385 aaPredicted RBP3.89□□□□□ -1.79
SRP54-211ENST00000556445 MALSU1Q96EH3 234 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 TRGV9Q99603 122 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 MGST2Q99735 147 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 MAP1LC3AQ9H492 121 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 VSIRQ9H7M9 311 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 SLC25A22Q9H936 323 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 RPS10P5Q9NQ39 176 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 TMEM167BQ9NRX6 74 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 ZNRD1Q9P1U0 126 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 NCOR2Q9Y618 2525 aa3.89□□□□□ -1.79
SRP54-211ENST00000556445 DMDP11532 3685 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 IGHV3OR16-12A0A075B7B8 117 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 TRAV30A0A087WSZ9 112 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 IGHV3-72A0A0B4J1Y9 119 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 A0A0G2JLM5 398 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 FAM240AA0A1B0GVK7 77 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 TCRBV4S1A1TA0A5B7 111 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 IGLC7A0M8Q6 106 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 C7orf77A4D0Y5 90 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 CYSRT1A8MQ03 144 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 C9JQL5 133 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 H3BQ15 152 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 K7EQD1 137 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 LY6HO94772 140 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 NXPH4O95158 308 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 CNIH1O95406 144 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 IGKV1D-33P01593 117 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 IGKV1-33P01594 117 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 OR5G3P0C626 314 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 NBEAP1P0C6P0 100 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 COX6B1P14854 86 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 SLC25A16P16260 332 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 OR10J1P30954 320 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 CRYBA4P53673 196 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 FGF8P55075 233 aaPredicted RBP3.88□□□□□ -1.79
SRP54-211ENST00000556445 DIAPH2-AS1Q14236 149 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 HES1Q14469 280 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 RNF212Q495C1 297 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 MUC21Q5SSG8 566 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 CYP2G1PQ6ZSU1 146 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 CYB561D1Q8N8Q1 229 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 OR10W1Q8NGF6 305 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 SRSF12Q8WXF0 261 aaKnown RBP3.88□□□□□ -1.79
SRP54-211ENST00000556445 RPUSD4Q96CM3 377 aaKnown RBP3.88□□□□□ -1.79
SRP54-211ENST00000556445 BTF3L4Q96K17 158 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 BPESC1Q9GZL8 116 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 FBXL15Q9H469 300 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 TMEM242Q9NWH2 141 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 NAT8Q9UHE5 227 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 FUT9Q9Y231 359 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 HILPDAQ9Y5L2 63 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 F11RQ9Y624 299 aaKnown RBP3.88□□□□□ -1.79
SRP54-211ENST00000556445 RFNGQ9Y644 331 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 ATRXP46100 2492 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 DMXL1Q9Y485 3027 aa3.88□□□□□ -1.79
SRP54-211ENST00000556445 PRRC2CQ9Y520 2896 aaKnown RBP3.87□□□□□ -1.79
SRP54-211ENST00000556445 WDFY3Q8IZQ1 3526 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 CENPVL3A0A0U1RRI6 287 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 ZNF727A8MUV8 499 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 C11orf94C9JXX5 98 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 COX7A2P2O60397 106 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 YIF1AO95070 293 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 MT-ND4LP03901 98 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 DEFA4P12838 97 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 FOLR2P14207 255 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 HIST1H1BP16401 226 aaKnown RBP3.87□□□□□ -1.79
SRP54-211ENST00000556445 GCHFRP30047 84 aa3.87□□□□□ -1.79
SRP54-211ENST00000556445 APOC4P55056 127 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms