RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 LINC01619G3V211 115 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 ISLRO14498 428 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 HIST1H1BP16401 226 aaKnown RBP7.57□□□□□ -1.2
PSEN1-213ENST00000555386 SUMO1P63165 101 aaKnown RBP7.57□□□□□ -1.2
PSEN1-213ENST00000555386 ZNF90Q03938 601 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 PATE2Q6UY27 113 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 OR1L6Q8NGR2 347 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 EEF1AKMT3Q96AZ1 226 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 IGF2BP2-AS1Q96M15 143 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 THYN1Q9P016 225 aa7.57□□□□□ -1.2
PSEN1-213ENST00000555386 PEF1Q9UBV8 284 aaKnown RBP7.57□□□□□ -1.2
PSEN1-213ENST00000555386 IGLL1P15814 213 aa7.56□□□□□ -1.2
PSEN1-213ENST00000555386 GPR183P32249 361 aa7.56□□□□□ -1.2
PSEN1-213ENST00000555386 ERVFC1-1P60608 527 aa7.56□□□□□ -1.2
PSEN1-213ENST00000555386 LINC00482Q8N8I6 264 aa7.56□□□□□ -1.2
PSEN1-213ENST00000555386 TMEM18Q96B42 140 aa7.56□□□□□ -1.2
PSEN1-213ENST00000555386 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
PSEN1-213ENST00000555386 V9GYV3 84 aa7.56□□□□□ -1.2
PSEN1-213ENST00000555386 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 HYPMO75409 117 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 AMBPP02760 352 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 MT-ND6P03923 174 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 CLEC3BP05452 202 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 HOXD3P31249 432 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-213ENST00000555386 SYNJ2BPP57105 145 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 JOSD1Q15040 202 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-213ENST00000555386 Q56UQ5 140 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 PDZD11Q5EBL8 140 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 WDR73Q6P4I2 378 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 FAM231DQ6ZW35 169 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 LINC00305Q7Z4B0 112 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 DLX4Q92988 240 aaPredicted RBP7.55□□□□□ -1.2
PSEN1-213ENST00000555386 FXYD5Q96DB9 178 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 CCDC140Q96MF4 163 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 CHRDL1Q9BU40 450 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 MRPL36Q9P0J6 103 aaKnown RBP7.55□□□□□ -1.2
PSEN1-213ENST00000555386 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.55□□□□□ -1.2
PSEN1-213ENST00000555386 TRAV5A0A0B4J249 113 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 G3V4G9 280 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 K7EIM0 57 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 BMPR1BO00238 502 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 BRI3O95415 125 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 IGLV2-8P01709 118 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 ARL3P36405 182 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 MORN5Q5VZ52 161 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 GNB1LQ9BYB4 327 aa7.55□□□□□ -1.2
PSEN1-213ENST00000555386 SORL1Q92673 2214 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 TRBV7-1A0A0A6YYK4 115 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 SMIM27A0A1W2PRY6 76 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 LINC00587B1AMM8 73 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 SLC17A3O00476 420 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 PEX7O00628 323 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 OVOL1O14753 267 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 FHL3Q13643 280 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 TMEM183BQ1AE95 376 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 IBA57Q5T440 356 aaKnown RBP7.54□□□□□ -1.2
PSEN1-213ENST00000555386 GBGT1Q8N5D6 347 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 ZNF502Q8TBZ5 544 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 C21orf62Q9NYP8 219 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 TMEM14CQ9P0S9 112 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 SELENOKQ9Y6D0 94 aa7.54□□□□□ -1.2
PSEN1-213ENST00000555386 IGHV3OR16-8A0A075B7F1 116 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 I3L2K1 104 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 PYYP10082 97 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 ESDP10768 282 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 ORM2P19652 201 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 MFAP4P55083 255 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 OR5I1Q13606 314 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 RASL11AQ6T310 242 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 OR1B1Q8NGR6 318 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 VN1R17PQ8TDU5 208 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 RNF24Q9Y225 148 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 HIGD1AQ9Y241 93 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 KLF12Q9Y4X4 402 aa7.53□□□□□ -1.2
PSEN1-213ENST00000555386 DNAH3Q8TD57 4116 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 GNG7O60262 68 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 SAP30O75446 220 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 PRB2P02812 416 aaPredicted RBP7.52□□□□□ -1.21
PSEN1-213ENST00000555386 NBEAP1P0C6P0 100 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 IGLC1P0CG04 106 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 GP9P14770 177 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 ADMP35318 185 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 PKIAP61925 76 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 Q0VG73 95 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 S100A7AQ86SG5 101 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 BAGE2Q86Y30 109 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 OR8I2Q8N0Y5 310 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 C5orf17Q8NAS9 161 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 MRPL18Q9H0U6 180 aaKnown RBP7.52□□□□□ -1.21
PSEN1-213ENST00000555386 EPDR1Q9UM22 224 aa7.52□□□□□ -1.21
PSEN1-213ENST00000555386 TRAV30A0A087WSZ9 112 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 IZUMO1RA6ND01 250 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 ZNF207O43670 478 aaKnown RBP7.51□□□□□ -1.21
PSEN1-213ENST00000555386 HLA-DQA1P01909 254 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 GZMBP10144 247 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 MGST1P10620 155 aaKnown RBP7.51□□□□□ -1.21
PSEN1-213ENST00000555386 EDN2P20800 178 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 UBE2G1P62253 170 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 PAFAH1B2P68402 229 aa7.51□□□□□ -1.21
PSEN1-213ENST00000555386 KLK9Q2XQG4 91 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms