RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 SHANK2-AS3Q9BTD1 123 aa10.51□□□□□ -0.73
SHMT2-217ENST00000555116 SLC25A39Q9BZJ4 359 aaPredicted RBP10.51□□□□□ -0.73
SHMT2-217ENST00000555116 TMPRSS5Q9H3S3 457 aa10.51□□□□□ -0.73
SHMT2-217ENST00000555116 HIGD1AQ9Y241 93 aa10.51□□□□□ -0.73
SHMT2-217ENST00000555116 NBEAL2Q6ZNJ1 2754 aa10.5□□□□□ -0.73
SHMT2-217ENST00000555116 ZNF688P0C7X2 276 aa10.5□□□□□ -0.73
SHMT2-217ENST00000555116 CDC34P49427 236 aaPredicted RBP10.5□□□□□ -0.73
SHMT2-217ENST00000555116 RCHY1Q96PM5 261 aa10.5□□□□□ -0.73
SHMT2-217ENST00000555116 ZMAT4Q9H898 229 aa10.5□□□□□ -0.73
SHMT2-217ENST00000555116 PXMP4Q9Y6I8 212 aa10.5□□□□□ -0.73
SHMT2-217ENST00000555116 COLCA2A8K830 154 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 C1orf196B1AJZ1 125 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 OR5G3P0C626 314 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 S100A7P31151 101 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 PRR20EP86478 221 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 PRR20CP86479 221 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 PRR20DP86480 221 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 PRR20BP86481 221 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 PRR20AP86496 221 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 RAB31Q13636 194 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 RNF212Q495C1 297 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 MIC13Q5XKP0 118 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 LEMD1Q68G75 181 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 C17orf77Q96MU5 243 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 UHRF2Q96PU4 802 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 SPATA25Q9BR10 227 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 SEPSECSQ9HD40 501 aaKnown RBP10.49□□□□□ -0.73
SHMT2-217ENST00000555116 SOCS3O14543 225 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 S100A8P05109 93 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 S100A9P06702 114 aaKnown RBP10.49□□□□□ -0.73
SHMT2-217ENST00000555116 RPL35AP18077 110 aaKnown RBP10.49□□□□□ -0.73
SHMT2-217ENST00000555116 NIPSNAP3BQ9BS92 247 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
SHMT2-217ENST00000555116 TAGLN2P37802 199 aaKnown RBP10.48□□□□□ -0.73
SHMT2-217ENST00000555116 RPL29P47914 159 aaKnown RBP10.48□□□□□ -0.73
SHMT2-217ENST00000555116 PSMB3P49720 205 aa10.48□□□□□ -0.73
SHMT2-217ENST00000555116 MEF2BQ02080 365 aaPredicted RBP10.48□□□□□ -0.73
SHMT2-217ENST00000555116 TMEM37Q8WXS4 190 aa10.48□□□□□ -0.73
SHMT2-217ENST00000555116 TVP23CQ96ET8 276 aa10.48□□□□□ -0.73
SHMT2-217ENST00000555116 RETNQ9HD89 108 aa10.48□□□□□ -0.73
SHMT2-217ENST00000555116 MANBALQ9NQG1 85 aa10.48□□□□□ -0.73
SHMT2-217ENST00000555116 KIR2DL5BA0A0G2JN68 375 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 KIR2DL5BA0A0G2JPC4 375 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 A0A1W2PPV4 95 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 S100A6P06703 90 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 GALR1P47211 349 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 PSMG4Q5JS54 123 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 KIR2DL5AQ8N109 375 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 KIR2DL5BQ8NHK3 375 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 GATAD1Q8WUU5 269 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 GPR82Q96P67 336 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 TCEAL7Q9BRU2 100 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 APOC4P55056 127 aa10.47□□□□□ -0.73
SHMT2-217ENST00000555116 KNCNA6PVL3 124 aa10.46□□□□□ -0.74
SHMT2-217ENST00000555116 COX7A2P2O60397 106 aa10.46□□□□□ -0.74
SHMT2-217ENST00000555116 NDUFS6O75380 124 aaKnown RBP10.46□□□□□ -0.74
SHMT2-217ENST00000555116 SNRPD3P62318 126 aaKnown RBP10.46□□□□□ -0.74
SHMT2-217ENST00000555116 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.46□□□□□ -0.74
SHMT2-217ENST00000555116 LINC00305Q7Z4B0 112 aa10.46□□□□□ -0.74
SHMT2-217ENST00000555116 S100A7AQ86SG5 101 aa10.46□□□□□ -0.74
SHMT2-217ENST00000555116 A0A087WWC5 75 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 ELOA3CA0A087WX78 387 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-217ENST00000555116 UBE2CO00762 179 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 MRPS12O15235 138 aaKnown RBP10.45□□□□□ -0.74
SHMT2-217ENST00000555116 PAGE4O60829 102 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 MT-ND4LP03901 98 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 RPL7P18124 248 aaKnown RBP10.45□□□□□ -0.74
SHMT2-217ENST00000555116 MORN5Q5VZ52 161 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 C10orf113Q5VZT2 155 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 HIST1H2BAQ96A08 127 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 ISOC2Q96AB3 205 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 DNAJC4Q9NNZ3 241 aa10.45□□□□□ -0.74
SHMT2-217ENST00000555116 TMEM250H0YL14 139 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 ID1P41134 155 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
SHMT2-217ENST00000555116 OR1L4Q8NGR5 311 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 C2CD4CQ8TF44 421 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 ISLRO14498 428 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 ACTL10Q5JWF8 245 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 SAMD13Q5VXD3 122 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 Q6ZWC4 215 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 STHQ8IWL8 128 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 WWC2-AS2Q96NR7 200 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 OVOL2Q9BRP0 275 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 CSTL1Q9H114 145 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 SDF2L1Q9HCN8 221 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 RNF24Q9Y225 148 aa10.44□□□□□ -0.74
SHMT2-217ENST00000555116 A0A087X0K7 114 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 ZNF727A8MUV8 499 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 B4DEV8 164 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 CXorf1O96002 111 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 ARL14EPLP0DKL9 152 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 RHOBP62745 196 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 PNRC1Q12796 327 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-217ENST00000555116 ZFP82Q8N141 532 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
SHMT2-217ENST00000555116 PFDN5Q99471 154 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms