RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 RFNGQ9Y644 331 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 DNAH10Q8IVF4 4471 aa6.28□□□□□ -1.4
ACTN1-213ENST00000554508 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 TRAV8-2A0A0B4J237 113 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 TRAV5A0A0B4J249 113 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 TEX48A0A1B0GUV7 120 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 MRPS12O15235 138 aaKnown RBP6.27□□□□□ -1.41
ACTN1-213ENST00000554508 BCL2L11O43521 198 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 PSG3Q16557 428 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 C12orf74Q32Q52 190 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 LGALSLQ3ZCW2 172 aaPredicted RBP6.27□□□□□ -1.41
ACTN1-213ENST00000554508 MORN5Q5VZ52 161 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 Q6ZTC4 211 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 GNPNAT1Q96EK6 184 aaPredicted RBP6.27□□□□□ -1.41
ACTN1-213ENST00000554508 IGF2BP2-AS1Q96M15 143 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 PSMG3Q9BT73 122 aaPredicted RBP6.27□□□□□ -1.41
ACTN1-213ENST00000554508 ZNF471Q9BX82 626 aaPredicted RBP6.27□□□□□ -1.41
ACTN1-213ENST00000554508 SH3BGRL3Q9H299 93 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 CYTL1Q9NRR1 136 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 APLNQ9ULZ1 77 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
ACTN1-213ENST00000554508 HBE1P02100 147 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 CNN1P51911 297 aaKnown RBP6.26□□□□□ -1.41
ACTN1-213ENST00000554508 RAB2AP61019 212 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 RHOBP62745 196 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 ACOT6Q3I5F7 207 aaPredicted RBP6.26□□□□□ -1.41
ACTN1-213ENST00000554508 IGFL4Q6B9Z1 124 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 LCN15Q6UWW0 184 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 AMTNQ6UX39 209 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 BPIFA4PQ86YQ2 179 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 C1orf158Q8N1D5 194 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 RNF182Q8N6D2 247 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 ZNF738Q8NE65 137 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 OR10G9Q8NGN4 311 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 OR10G7Q8NGN6 311 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 OR2G3Q8NGZ4 309 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 SLC50A1Q9BRV3 221 aa6.26□□□□□ -1.41
ACTN1-213ENST00000554508 MRPL32Q9BYC8 188 aaKnown RBP6.26□□□□□ -1.41
ACTN1-213ENST00000554508 IGHV4-4A0A075B6R2 117 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 DEFB131BA0A096LNP1 70 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 A0A1W2PPV4 95 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 MBP02144 154 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 SNRPCP09234 159 aaKnown RBP6.25□□□□□ -1.41
ACTN1-213ENST00000554508 M6PRP20645 277 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 EIF5AP63241 154 aaKnown RBP6.25□□□□□ -1.41
ACTN1-213ENST00000554508 SERF2P84101 59 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 RRN3P1Q2M238 152 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 FAM122CQ6P4D5 195 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 MIR17HGQ75NE6 70 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 OR8A1Q8NGG7 326 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 TMEM208Q9BTX3 173 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 FUT9Q9Y231 359 aa6.25□□□□□ -1.41
ACTN1-213ENST00000554508 FRAS1Q86XX4 4008 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 LOC102723971A0A1B0GUV8 181 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 H3BTX0 84 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 BOLA2-SMG1P6H3BVE0 249 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 OR7C2O60412 319 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 EIF3GO75821 320 aaKnown RBP eCLIP6.24□□□□□ -1.41
ACTN1-213ENST00000554508 INSP01308 110 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 TPT1P13693 172 aaKnown RBP6.24□□□□□ -1.41
ACTN1-213ENST00000554508 NKX2-5P52952 324 aaPredicted RBP6.24□□□□□ -1.41
ACTN1-213ENST00000554508 EMP1P54849 157 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 TAS2R45P59539 299 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 GUK1Q16774 197 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 SPINK13Q1W4C9 94 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 AKR1C8PQ5T2L2 129 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 C9orf62Q8N4C0 152 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 RPUSD4Q96CM3 377 aaKnown RBP6.24□□□□□ -1.41
ACTN1-213ENST00000554508 FAM210BQ96KR6 192 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 NIPSNAP3BQ9BS92 247 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 SLC25A2Q9BXI2 301 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 ZNF331Q9NQX6 463 aaPredicted RBP6.24□□□□□ -1.41
ACTN1-213ENST00000554508 PPP1R14DQ9NXH3 145 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 DKK2Q9UBU2 259 aa6.24□□□□□ -1.41
ACTN1-213ENST00000554508 EPPK1P58107 5090 aaKnown RBP6.24□□□□□ -1.41
ACTN1-213ENST00000554508 H3BQ15 152 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 M0R2Z0 102 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 HMGB3O15347 200 aaKnown RBP6.23□□□□□ -1.41
ACTN1-213ENST00000554508 CRXO43186 299 aaPredicted RBP6.23□□□□□ -1.41
ACTN1-213ENST00000554508 OR10J4P0C629 311 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 IGLC2P0DOY2 106 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 PYYP10082 97 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 CDC34P49427 236 aaPredicted RBP6.23□□□□□ -1.41
ACTN1-213ENST00000554508 HIST1H1AQ02539 215 aaPredicted RBP6.23□□□□□ -1.41
ACTN1-213ENST00000554508 KHDC3LQ587J8 217 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 FAM222AQ5U5X8 452 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 ZNF767PQ75MW2 155 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 BAP18Q8IXM2 172 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 TMEM256Q8N2U0 113 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 RPP25LQ8N5L8 163 aaKnown RBP6.23□□□□□ -1.41
ACTN1-213ENST00000554508 BLNKQ8WV28 456 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 SAT2Q96F10 170 aaPredicted RBP6.23□□□□□ -1.41
ACTN1-213ENST00000554508 NDUFAF3Q9BU61 184 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 PAXXQ9BUH6 204 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 ACTR3CQ9C0K3 210 aaPredicted RBP6.23□□□□□ -1.41
ACTN1-213ENST00000554508 OR51M1Q9H341 326 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 TMEM14CQ9P0S9 112 aa6.23□□□□□ -1.41
ACTN1-213ENST00000554508 YTHDF2Q9Y5A9 579 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms