RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SNRPD3P62318 126 aaKnown RBP9.6□□□□□ -0.87
SHMT2-211ENST00000554310 PRR20EP86478 221 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 PRR20CP86479 221 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 PRR20DP86480 221 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 PRR20BP86481 221 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 PRR20AP86496 221 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 MIC13Q5XKP0 118 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 TMEM88Q6PEY1 159 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 STHQ8IWL8 128 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 CYB561D1Q8N8Q1 229 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 SMCO4Q9NRQ5 59 aa9.6□□□□□ -0.87
SHMT2-211ENST00000554310 DYNC2H1Q8NCM8 4307 aaKnown RBP9.6□□□□□ -0.87
SHMT2-211ENST00000554310 H3BQ15 152 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 M0R036 132 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-211ENST00000554310 S100A7P31151 101 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 B2MP61769 119 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
SHMT2-211ENST00000554310 PSMG4Q5JS54 123 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.87
SHMT2-211ENST00000554310 CBLN2Q8IUK8 224 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 RPS10P5Q9NQ39 176 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 AGRNO00468 2067 aa9.59□□□□□ -0.87
SHMT2-211ENST00000554310 TMEM250H0YL14 139 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 LINC00869P0C866 280 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 STAG3L2P0CL84 134 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 STAG3L3P0CL85 134 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 ATF4P18848 351 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-211ENST00000554310 RHOBP62745 196 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 SAMD13Q5VXD3 122 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 MORN3Q6PF18 240 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-211ENST00000554310 C15orf54Q8N8G6 183 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 TVP23CQ96ET8 276 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 NIPSNAP3BQ9BS92 247 aa9.58□□□□□ -0.88
SHMT2-211ENST00000554310 RYR3Q15413 4870 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 A0A087WWC5 75 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 A0A0J9YWU9 116 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 HMGB3O15347 200 aaKnown RBP9.57□□□□□ -0.88
SHMT2-211ENST00000554310 CXorf1O96002 111 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 SELENOTP62341 195 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 PNRC1Q12796 327 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-211ENST00000554310 GCSAMLQ5JQS6 135 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 CYP2G1PQ6ZSU1 146 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 OR8I2Q8N0Y5 310 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 TXNDC17Q9BRA2 123 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 TMPRSS5Q9H3S3 457 aa9.57□□□□□ -0.88
SHMT2-211ENST00000554310 LOC105371267A0A1B0GV96 52 aa9.56□□□□□ -0.88
SHMT2-211ENST00000554310 KNCNA6PVL3 124 aa9.56□□□□□ -0.88
SHMT2-211ENST00000554310 B4DEV8 164 aa9.56□□□□□ -0.88
SHMT2-211ENST00000554310 EIF3GO75821 320 aaKnown RBP eCLIP9.56□□□□□ -0.88
SHMT2-211ENST00000554310 MEOX2P50222 304 aa9.56□□□□□ -0.88
SHMT2-211ENST00000554310 CEBPGP53567 150 aa9.56□□□□□ -0.88
SHMT2-211ENST00000554310 OR1B1Q8NGR6 318 aa9.56□□□□□ -0.88
SHMT2-211ENST00000554310 GPR82Q96P67 336 aa9.56□□□□□ -0.88
SHMT2-211ENST00000554310 COLCA2A8K830 154 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 ISLRO14498 428 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 SOCS3O14543 225 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 PAGE4O60829 102 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 ORM2P19652 201 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 GATA2P23769 480 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-211ENST00000554310 ID1P41134 155 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 GALR1P47211 349 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 PLP1P60201 277 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 S100A7AQ86SG5 101 aa9.55□□□□□ -0.88
SHMT2-211ENST00000554310 C11orf68Q9H3H3 251 aaKnown RBP9.55□□□□□ -0.88
SHMT2-211ENST00000554310 LCE6AA0A183 80 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 ZNF98A6NK75 572 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 ZNF727A8MUV8 499 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 F6UZH7 168 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 H3BRN7 92 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 PDE6DO43924 150 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 OR5G3P0C626 314 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 ARL14EPLP0DKL9 152 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 HLA-DRB4P13762 266 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 NUTF2P61970 127 aaKnown RBP9.54□□□□□ -0.88
SHMT2-211ENST00000554310 IQCF2Q8IXL9 164 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 OR11H2Q8NH07 326 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 MRPL32Q9BYC8 188 aaKnown RBP9.54□□□□□ -0.88
SHMT2-211ENST00000554310 SDF2L1Q9HCN8 221 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 NAT8Q9UHE5 227 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 HIGD1AQ9Y241 93 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 HLA-DRB4X5D2U9 266 aa9.54□□□□□ -0.88
SHMT2-211ENST00000554310 HYPMO75409 117 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 MT-ND4LP03901 98 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 GIG44P09565 113 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-211ENST00000554310 GCHFRP30047 84 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 AKR1C3P42330 323 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 FOXI2Q6ZQN5 318 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 SHANK2-AS3Q9BTD1 123 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 C1QTNF4Q9BXJ3 329 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 SLC25A39Q9BZJ4 359 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-211ENST00000554310 DOK5Q9P104 306 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 RNF24Q9Y225 148 aa9.53□□□□□ -0.88
SHMT2-211ENST00000554310 CXorf65A6NEN9 183 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 NUPR2A6NF83 97 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 C11orf94C9JXX5 98 aa9.52□□□□□ -0.89
SHMT2-211ENST00000554310 H3BMM0 161 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms