RNA–Protein interactions for RNA: ENST00000554214.5

ATXN3-225, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-225ENST00000554214 CEACAM18A8MTB9 384 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 ZNF727A8MUV8 499 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 CCDC179H3BU77 68 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 PITX3O75364 302 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 SNRNP200O75643 2136 aaKnown RBP3.36□□□□□ -1.87
ATXN3-225ENST00000554214 SNCGO76070 127 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 SLC2A10O95528 541 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 ZNF682O95780 498 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 CT62P0C5K7 136 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 LEPP41159 167 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 PPICP45877 212 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 RBM11P57052 281 aaKnown RBP3.36□□□□□ -1.87
ATXN3-225ENST00000554214 KRTDAPP60985 99 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 C17orf58Q2M2W7 97 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 MPV17L2Q567V2 206 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 PSMG4Q5JS54 123 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 LEG1Q6P5S2 330 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 ZNF322Q6U7Q0 402 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-225ENST00000554214 ANKRD37Q7Z713 158 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 C10orf111Q8N326 155 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 OR5D14Q8NGL3 314 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 OR5H2Q8NGV7 314 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 OR2T10Q8NGZ9 312 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 OR51H1Q8NH63 302 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 C18orf32Q8TCD1 76 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 TMEM37Q8WXS4 190 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 AQP3Q92482 292 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 NEIL2Q969S2 332 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 KIR2DL4Q99706 377 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 SCRT1Q9BWW7 348 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 CST11Q9H112 138 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 FGF20Q9NP95 211 aaPredicted RBP3.36□□□□□ -1.87
ATXN3-225ENST00000554214 ANAPC11Q9NYG5 84 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 LAMTOR3Q9UHA4 124 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 PRO0461Q9UI25 63 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 ZNF835Q9Y2P0 537 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 POLR1DQ9Y2S0 133 aa3.36□□□□□ -1.87
ATXN3-225ENST00000554214 CNTRLQ7Z7A1 2325 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 TRAV1-2A0A0B4J238 106 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 MUC21A0A0G2JKD1 596 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 MUC21A0A140T8X8 626 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 LOC102725191A0A1B0GVB3 256 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 CXorf1O96002 111 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 APOC2P02655 101 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 PRH1P02810 166 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 SRP19P09132 144 aaKnown RBP3.35□□□□□ -1.87
ATXN3-225ENST00000554214 LINC00694P0DN24 101 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 GALR1P47211 349 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 SLC25A1P53007 311 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 DLX1P56177 255 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 FOXF1Q12946 379 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 GGTLC2Q14390 218 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 GUSBP1Q15486 140 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 AMTNQ6UX39 209 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 Q6ZVH6 145 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 CMC1Q7Z7K0 106 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 TMEM179BQ7Z7N9 219 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 MOB3BQ86TA1 216 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 LINC00471Q8N535 108 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 OR4X2Q8NGF9 303 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 OR9G1Q8NH87 305 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 MRPL30Q8TCC3 161 aaKnown RBP3.35□□□□□ -1.87
ATXN3-225ENST00000554214 MRPL24Q96A35 216 aaKnown RBP3.35□□□□□ -1.87
ATXN3-225ENST00000554214 SEC22AQ96IW7 307 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 AGMATQ9BSE5 352 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 COMMD5Q9GZQ3 224 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 CHST6Q9GZX3 395 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 PBOV1Q9GZY1 135 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 RETNQ9HD89 108 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 MANBALQ9NQG1 85 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 RCL1Q9Y2P8 373 aaKnown RBP3.35□□□□□ -1.87
ATXN3-225ENST00000554214 TRAPPC1Q9Y5R8 145 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 MPC1Q9Y5U8 109 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 ANKRD12Q6UB98 2062 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 ANK2Q01484 3957 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 INTS1Q8N201 2190 aaKnown RBP3.35□□□□□ -1.87
ATXN3-225ENST00000554214 ABCA4P78363 2273 aa3.35□□□□□ -1.87
ATXN3-225ENST00000554214 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 NSG1A0A0A6YYJ2 146 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 TRAV17A0A0B4J275 112 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 LRRC30A6NM36 301 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 H3BMG7 143 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 H3BTX0 84 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 CCL22O00626 93 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 UQCRQO14949 82 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 SOCS1O15524 211 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 APOMO95445 188 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 LSM8O95777 96 aaKnown RBP3.34□□□□□ -1.87
ATXN3-225ENST00000554214 NAPSAO96009 420 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 STATHP02808 62 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 MT-ND6P03923 174 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 IGLC6P0CF74 106 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 COX6A1P12074 109 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 CRISP2P16562 243 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 LOXP28300 417 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-225ENST00000554214 PEBP1P30086 187 aaKnown RBP3.34□□□□□ -1.87
ATXN3-225ENST00000554214 VDAC2P45880 294 aaPredicted RBP3.34□□□□□ -1.87
ATXN3-225ENST00000554214 PSMB3P49720 205 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 TMEM258P61165 79 aa3.34□□□□□ -1.87
ATXN3-225ENST00000554214 ATXN7L3Q14CW9 347 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms