RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SCN1AP35498 2009 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 ETV6P41212 452 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 ROMO1P60602 79 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 MRPS10P82664 201 aaKnown RBP1.19□□□□□ -2.22
SRP54-204ENST00000553923 ELOBQ15370 118 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 FAM135BQ49AJ0 1406 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 MEIG1Q5JSS6 88 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 TMEM91Q6ZNR0 172 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 TEN1Q86WV5 123 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 KCNRGQ8N5I3 272 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 TCTEX1D1Q8N7M0 179 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 LINC00304Q8N9R0 145 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 SFT2D1Q8WV19 159 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 MUCL1Q96DR8 90 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 TVP23CQ96ET8 276 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 NABP2Q9BQ15 211 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 PDCD10Q9BUL8 212 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 TRIP11Q15643 1979 aa1.19□□□□□ -2.22
SRP54-204ENST00000553923 TCOF1Q13428 1488 aaKnown RBP1.18□□□□□ -2.22
SRP54-204ENST00000553923 SMG6Q86US8 1419 aaKnown RBP1.18□□□□□ -2.22
SRP54-204ENST00000553923 SCN4AP35499 1836 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 IGKV1D-17A0A075B6S4 117 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 IGKV3D-11A0A0A0MRZ8 115 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 TRGV4A0A0C4DH28 118 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 IGHV1-24A0A0C4DH33 117 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 C20orf202A1L168 122 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 C9orf170A2RU37 121 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 ZNF736B4DX44 427 aaPredicted RBP1.18□□□□□ -2.22
SRP54-204ENST00000553923 EDF1O60869 148 aaKnown RBP1.18□□□□□ -2.22
SRP54-204ENST00000553923 ERC2-IT1O76042 136 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 NCR2O95944 276 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 IGLV1-51P01701 117 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 PYYP10082 97 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 RNASE2P10153 161 aaKnown RBP1.18□□□□□ -2.22
SRP54-204ENST00000553923 MIFP14174 115 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 FGF7P21781 194 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 BRS3P32247 399 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 PLGLB1Q02325 96 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 CCSMST1Q4G0I0 132 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 OCIAD2Q56VL3 154 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 C2orf82Q6UX34 121 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 OR5AS1Q8N127 324 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 C9orf163Q8N9P6 203 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.18□□□□□ -2.22
SRP54-204ENST00000553923 OR10AC1Q8NH08 325 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 OTOSQ8NHW6 89 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 SMIM7Q9BQ49 75 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 TMEM191AQ9H0A3 160 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 SLC35B3Q9H1N7 401 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 CCDC167Q9P0B6 97 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 PRO2289Q9P1D8 64 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 LSM2Q9Y333 95 aaKnown RBP1.18□□□□□ -2.22
SRP54-204ENST00000553923 DNAJC15Q9Y5T4 150 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 LHFPL6Q9Y693 200 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 MYH3P11055 1940 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 ARHGEF11O15085 1522 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 PCM1Q15154 2024 aa1.18□□□□□ -2.22
SRP54-204ENST00000553923 PRG4Q92954 1404 aaPredicted RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 TRBV20-1A0A075B6N2 111 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 TRAV10A0A0B4J240 114 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 TRAV12-1A0A0B4J245 112 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 PNMA8CA0A1B0GUJ8 204 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 LOC100130705A0A1B0GUX0 176 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 E7EUB6 86 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 H3BRN7 92 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 CD3DP04234 171 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 PRB4P10163 310 aaPredicted RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 HIST1H1DP16402 221 aaKnown RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 ZNF93P35789 620 aaPredicted RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 DSCR4P56555 118 aaPredicted RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 IGFBP7Q16270 282 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 SCIMPQ6UWF3 145 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 CASC2Q6XLA1 102 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 ARPINQ7Z6K5 226 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 RPS19BP1Q86WX3 136 aaKnown RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 SNX29P2Q8IUI4 249 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 ATOH7Q8N100 152 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 METTL1Q9UBP6 276 aaKnown RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 ZNF106Q9H2Y7 1883 aaKnown RBP1.17□□□□□ -2.22
SRP54-204ENST00000553923 DOCK9Q9BZ29 2069 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 PXDNLA1KZ92 1463 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 MYH2Q9UKX2 1941 aa1.17□□□□□ -2.22
SRP54-204ENST00000553923 RTEL1-TNFRSF6BF6WH68 1400 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 KIAA1107Q9UPP5 1409 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 SLIT2O94813 1529 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 C2orf70A6NJV1 201 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 YPEL1O60688 119 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 APODP05090 189 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 MIC13Q5XKP0 118 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 TEX261Q6UWH6 196 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 IDO2Q6ZQW0 420 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 KRTAP13-1Q8IUC0 172 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 C5orf17Q8NAS9 161 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 CCL4L1Q8NHW4 92 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 ZNF431Q8TF32 576 aaPredicted RBP1.16□□□□□ -2.22
SRP54-204ENST00000553923 Q96M85 177 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 SDF2Q99470 211 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 SEC11CQ9BY50 192 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 SAR1AQ9NR31 198 aa1.16□□□□□ -2.22
SRP54-204ENST00000553923 SCN3BQ9NY72 215 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms