RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 TRAV8-2A0A0B4J237 113 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 K7EQG2 157 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 IGLV1-51P01701 117 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 SLC25A5P05141 298 aaKnown RBP10.59□□□□□ -0.71
CACNB3-216ENST00000550391 SRP19P09132 144 aaKnown RBP10.59□□□□□ -0.71
CACNB3-216ENST00000550391 ID1P41134 155 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 TFPI2P48307 235 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 INSL3P51460 131 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 C9orf66Q5T8R8 295 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 C5orf17Q8NAS9 161 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 MRPL53Q96EL3 112 aaKnown RBP10.59□□□□□ -0.71
CACNB3-216ENST00000550391 EPDR1Q9UM22 224 aa10.59□□□□□ -0.71
CACNB3-216ENST00000550391 C9JQL5 133 aa10.58□□□□□ -0.72
CACNB3-216ENST00000550391 CSN1S1P47710 185 aa10.58□□□□□ -0.72
CACNB3-216ENST00000550391 PSG3Q16557 428 aa10.58□□□□□ -0.72
CACNB3-216ENST00000550391 IGFL4Q6B9Z1 124 aa10.58□□□□□ -0.72
CACNB3-216ENST00000550391 ARL6IP6Q8N6S5 226 aa10.58□□□□□ -0.72
CACNB3-216ENST00000550391 CITED4Q96RK1 184 aa10.58□□□□□ -0.72
CACNB3-216ENST00000550391 SPAG8Q99932 426 aaPredicted RBP10.58□□□□□ -0.72
CACNB3-216ENST00000550391 SLC35B3Q9H1N7 401 aa10.58□□□□□ -0.72
CACNB3-216ENST00000550391 SCO2A0A1W2PP80 73 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 IZUMO1RA6ND01 250 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 OR4C46A6NHA9 309 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 TMEM250H0YL14 139 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 HLA-DMBP28068 263 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 SNRPD3P62318 126 aaKnown RBP10.57□□□□□ -0.72
CACNB3-216ENST00000550391 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 RNF182Q8N6D2 247 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 HIST1H2BAQ96A08 127 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 C11orf52Q96A22 123 aa10.57□□□□□ -0.72
CACNB3-216ENST00000550391 M0R3E3 92 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 PEX7O00628 323 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 GNG5P63218 68 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 GUCA2BQ16661 112 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 RPUSD4Q96CM3 377 aaKnown RBP10.56□□□□□ -0.72
CACNB3-216ENST00000550391 C20orf173Q96LM9 149 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 LINC00052Q96N35 136 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 ATG101Q9BSB4 218 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 KRTAP17-1Q9BYP8 105 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 RPH3ALQ9UNE2 315 aa10.56□□□□□ -0.72
CACNB3-216ENST00000550391 ZNF705FA8MVS1 300 aaPredicted RBP10.55□□□□□ -0.72
CACNB3-216ENST00000550391 DIRC3C9JPN6 131 aa10.55□□□□□ -0.72
CACNB3-216ENST00000550391 TCRAP04437 139 aa10.55□□□□□ -0.72
CACNB3-216ENST00000550391 CEBPGP53567 150 aa10.55□□□□□ -0.72
CACNB3-216ENST00000550391 FAM24BQ8N5W8 94 aa10.55□□□□□ -0.72
CACNB3-216ENST00000550391 CYB561D1Q8N8Q1 229 aa10.55□□□□□ -0.72
CACNB3-216ENST00000550391 ZNF738Q8NE65 137 aa10.55□□□□□ -0.72
CACNB3-216ENST00000550391 GPR61Q9BZJ8 451 aa10.55□□□□□ -0.72
CACNB3-216ENST00000550391 ZNF256Q9Y2P7 627 aaPredicted RBP10.55□□□□□ -0.72
CACNB3-216ENST00000550391 SERTM2A0A1B0GWG4 89 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 TMEM218A2RU14 115 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 K7EQM0 130 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 SFTA3P0C7M3 94 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 ZNF688P0C7X2 276 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 IGLL1P15814 213 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 AKR1C3P42330 323 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 SOHLH1Q5JUK2 328 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 GOLT1AQ6ZVE7 132 aa10.54□□□□□ -0.72
CACNB3-216ENST00000550391 S100A9P06702 114 aaKnown RBP10.53□□□□□ -0.72
CACNB3-216ENST00000550391 CNN1P51911 297 aaKnown RBP10.53□□□□□ -0.72
CACNB3-216ENST00000550391 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
CACNB3-216ENST00000550391 PSMG4Q5JS54 123 aa10.53□□□□□ -0.72
CACNB3-216ENST00000550391 C2CD4CQ8TF44 421 aa10.53□□□□□ -0.72
CACNB3-216ENST00000550391 BIRC6Q9NR09 4857 aa10.53□□□□□ -0.72
CACNB3-216ENST00000550391 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
CACNB3-216ENST00000550391 FBLL1A6NHQ2 334 aaKnown RBP10.52□□□□□ -0.73
CACNB3-216ENST00000550391 PRAC2D3DTV9 90 aa10.52□□□□□ -0.73
CACNB3-216ENST00000550391 BEAN1Q3B7T3 259 aa10.52□□□□□ -0.73
CACNB3-216ENST00000550391 FAM74A3Q4VXF1 159 aa10.52□□□□□ -0.73
CACNB3-216ENST00000550391 PARLQ9H300 379 aa10.52□□□□□ -0.73
CACNB3-216ENST00000550391 KLF12Q9Y4X4 402 aa10.52□□□□□ -0.73
CACNB3-216ENST00000550391 IGKV2-40A0A087WW87 121 aaPredicted RBP10.51□□□□□ -0.73
CACNB3-216ENST00000550391 ZNF727A8MUV8 499 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 KRBOX1C9JBD0 128 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 IGKV2D-40P01614 121 aaPredicted RBP10.51□□□□□ -0.73
CACNB3-216ENST00000550391 RPL35P42766 123 aaKnown RBP10.51□□□□□ -0.73
CACNB3-216ENST00000550391 TAS2R60P59551 318 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 DEFB131AP59861 70 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 TMEM183BQ1AE95 376 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 ZNF674Q2M3X9 581 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 TMEM75Q8N9X5 138 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 OR10J6PQ8NGY7 276 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 FMC1Q96HJ9 113 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 LINC00479Q96M42 142 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 DERL1Q9BUN8 251 aa10.51□□□□□ -0.73
CACNB3-216ENST00000550391 TRAV34A0A0B4J273 112 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 TRBV6-1A0A0K0K1D8 114 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 F8W036 122 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 PRB4P10163 310 aaPredicted RBP10.5□□□□□ -0.73
CACNB3-216ENST00000550391 UBE2G1P62253 170 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 EBLN2Q6P2I7 272 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 OR8A1Q8NGG7 326 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 SMIM7Q9BQ49 75 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 SEC11CQ9BY50 192 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 MAP6D1Q9H9H5 199 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 PSG8Q9UQ74 426 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 SORL1Q92673 2214 aa10.5□□□□□ -0.73
CACNB3-216ENST00000550391 IGLV2-11P01706 119 aa10.49□□□□□ -0.73
CACNB3-216ENST00000550391 FOXI2Q6ZQN5 318 aa10.49□□□□□ -0.73
CACNB3-216ENST00000550391 C9orf47Q6ZRZ4 202 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms