RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 NAV3Q8IVL0 2385 aa13□□□□□ -0.33
BRF1-208ENST00000546997 CBY3A6NI87 242 aa13□□□□□ -0.33
BRF1-208ENST00000546997 M0QZ24 198 aa13□□□□□ -0.33
BRF1-208ENST00000546997 SLC25A17O43808 307 aa13□□□□□ -0.33
BRF1-208ENST00000546997 ERHP84090 104 aaKnown RBP13□□□□□ -0.33
BRF1-208ENST00000546997 MRGPRG-AS1Q2M3A8 158 aa13□□□□□ -0.33
BRF1-208ENST00000546997 VMA21Q3ZAQ7 101 aa13□□□□□ -0.33
BRF1-208ENST00000546997 J3QLI3 93 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 PSG1P11464 419 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 CNTFRP26992 372 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 SEC11AP67812 179 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 CCDC144NLQ6NUI1 221 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 URB1-AS1Q96HZ7 61 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 FAM167A-AS1Q96KT0 104 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 ZNF355PQ9NSJ1 428 aa12.99□□□□□ -0.33
BRF1-208ENST00000546997 FAM231BA6NCW3 169 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 OOSP1A8MZH6 123 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 LEPROTL1O95214 131 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 HBBP68871 147 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 OR2T6Q8NHC8 308 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 DPF1Q92782 380 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 GFRA4Q9GZZ7 299 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 TPSG1Q9NRR2 321 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 GAGE12BA1L429 117 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 PSMB11A5LHX3 300 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 PEX7O00628 323 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 WT1-ASQ06250 92 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 C10orf55Q5SWW7 151 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 AMMECR1LQ6DCA0 310 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 SPATA12Q7Z6I5 190 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 TEX45Q8NA69 505 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 NDFIP1Q9BT67 221 aa12.98□□□□□ -0.33
BRF1-208ENST00000546997 MLANAQ16655 118 aa12.97□□□□□ -0.33
BRF1-208ENST00000546997 MAP1LC3CQ9BXW4 147 aa12.97□□□□□ -0.33
BRF1-208ENST00000546997 HSPB8Q9UJY1 196 aa12.97□□□□□ -0.33
BRF1-208ENST00000546997 MTORP42345 2549 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 OR2T8A6NH00 312 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 HIGD1CA8MV81 97 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 CA1P00915 261 aaPredicted RBP12.96□□□□□ -0.33
BRF1-208ENST00000546997 CRYGBP07316 175 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 UBE2L3P68036 154 aaKnown RBP12.96□□□□□ -0.33
BRF1-208ENST00000546997 PSG9Q00887 426 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 CD69Q07108 199 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 KRTAP1-1Q07627 177 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 ZNF329Q86UD4 541 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 OR1L4Q8NGR5 311 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 SLC25A2Q9BXI2 301 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 ZNF492Q9P255 531 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 KLF12Q9Y4X4 402 aa12.96□□□□□ -0.33
BRF1-208ENST00000546997 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.34
BRF1-208ENST00000546997 IGHV1-24A0A0C4DH33 117 aa12.96□□□□□ -0.34
BRF1-208ENST00000546997 MUC21A0A0G2JKD1 596 aa12.96□□□□□ -0.34
BRF1-208ENST00000546997 MUC21A0A140T8X8 626 aa12.96□□□□□ -0.34
BRF1-208ENST00000546997 A8MWL6 223 aa12.96□□□□□ -0.34
BRF1-208ENST00000546997 IGLC1P0CG04 106 aa12.96□□□□□ -0.34
BRF1-208ENST00000546997 MUC21Q5SSG8 566 aa12.96□□□□□ -0.34
BRF1-208ENST00000546997 HES1Q14469 280 aa12.95□□□□□ -0.34
BRF1-208ENST00000546997 GTF2H5Q6ZYL4 71 aa12.95□□□□□ -0.34
BRF1-208ENST00000546997 STXBP6Q8NFX7 210 aa12.95□□□□□ -0.34
BRF1-208ENST00000546997 TMEM190Q8WZ59 177 aa12.95□□□□□ -0.34
BRF1-208ENST00000546997 PRSS22Q9GZN4 317 aa12.95□□□□□ -0.34
BRF1-208ENST00000546997 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
BRF1-208ENST00000546997 CORTO00230 105 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 CIDEAO60543 219 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 MOSP00540 346 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 FSHBP01225 129 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 MYCNOSP40205 109 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 ANK3Q12955 4377 aaKnown RBP12.94□□□□□ -0.34
BRF1-208ENST00000546997 COX8AP10176 69 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 GPR183P32249 361 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.34
BRF1-208ENST00000546997 LINC01545Q5VT33 79 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 SIGLEC9Q9Y336 463 aa12.94□□□□□ -0.34
BRF1-208ENST00000546997 EBI3Q14213 229 aa12.93□□□□□ -0.34
BRF1-208ENST00000546997 BCL6BQ8N143 479 aaPredicted RBP12.93□□□□□ -0.34
BRF1-208ENST00000546997 Q8N6K4 173 aa12.93□□□□□ -0.34
BRF1-208ENST00000546997 PAXXQ9BUH6 204 aa12.93□□□□□ -0.34
BRF1-208ENST00000546997 RPP21Q9H633 154 aaKnown RBP12.93□□□□□ -0.34
BRF1-208ENST00000546997 RNF24Q9Y225 148 aa12.93□□□□□ -0.34
BRF1-208ENST00000546997 HIVEP1P15822 2718 aa12.93□□□□□ -0.34
BRF1-208ENST00000546997 TMEM238C9JI98 176 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 NBEAP1P0C6P0 100 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 UFSP1Q6NVU6 142 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 GPR82Q96P67 336 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 RNF5Q99942 180 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 MLST8Q9BVC4 326 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 FBXL15Q9H469 300 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 CAMPP49913 170 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 PPP1R27Q86WC6 154 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
BRF1-208ENST00000546997 FNDC4Q9H6D8 234 aaPredicted RBP12.92□□□□□ -0.34
BRF1-208ENST00000546997 NBR2O15453 112 aa12.91□□□□□ -0.34
BRF1-208ENST00000546997 RPL27AP46776 148 aaKnown RBP12.91□□□□□ -0.34
BRF1-208ENST00000546997 PIFOQ8TCI5 191 aa12.91□□□□□ -0.34
BRF1-208ENST00000546997 SSBP4Q9BWG4 385 aaPredicted RBP12.91□□□□□ -0.34
BRF1-208ENST00000546997 H3BRM9 83 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 FAM106CPP0CH98 169 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 TMEM11P17152 192 aa12.9□□□□□ -0.34
BRF1-208ENST00000546997 GATA2P23769 480 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms