RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 ARV1Q9H2C2 271 aa6.55□□□□□ -1.36
SSH1-205ENST00000546812 SLC25A32Q9H2D1 315 aa6.55□□□□□ -1.36
SSH1-205ENST00000546812 PFDN2Q9UHV9 154 aa6.55□□□□□ -1.36
SSH1-205ENST00000546812 A0A0D9SG52 128 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 KANTRA0A1W2PQU2 76 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 TMEM189A5PLL7 270 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 ZNF98A6NK75 572 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 K7EQG2 157 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 ATP6V0CP27449 155 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 KRTAP10-2P60368 255 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 SPATA31B1PQ5VZV4 182 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 Q6ZRG5 221 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 TMUB2Q71RG4 321 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 LINC00305Q7Z4B0 112 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 OR8I2Q8N0Y5 310 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 OR1L4Q8NGR5 311 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 C1QTNF4Q9BXJ3 329 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 CYTL1Q9NRR1 136 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 TIMM9Q9Y5J7 89 aa6.54□□□□□ -1.36
SSH1-205ENST00000546812 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 HMCN2Q8NDA2 5059 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 HELTA6NFD8 242 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 TAAR5O14804 337 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 ZNF688P0C7X2 276 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 S100A7P31151 101 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 EMP1P54849 157 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 RAB2AP61019 212 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 NUTF2P61970 127 aaKnown RBP6.53□□□□□ -1.36
SSH1-205ENST00000546812 C1orf194Q5T5A4 169 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 HYLS1Q96M11 299 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 NEU1Q99519 415 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 PSMG3Q9BT73 122 aaPredicted RBP6.53□□□□□ -1.36
SSH1-205ENST00000546812 DNAJC4Q9NNZ3 241 aa6.53□□□□□ -1.36
SSH1-205ENST00000546812 TRAV5A0A0B4J249 113 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 TEX48A0A1B0GUV7 120 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 SMIM9A6NGZ8 99 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 EIF3GO75821 320 aaKnown RBP eCLIP6.52□□□□□ -1.37
SSH1-205ENST00000546812 HTN3P15516 51 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 GALR1P47211 349 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 NKX2-5P52952 324 aaPredicted RBP6.52□□□□□ -1.37
SSH1-205ENST00000546812 LGALSLQ3ZCW2 172 aaPredicted RBP6.52□□□□□ -1.37
SSH1-205ENST00000546812 FAM122CQ6P4D5 195 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 TMEM88Q6PEY1 159 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 ZNF705AQ6ZN79 300 aaPredicted RBP6.52□□□□□ -1.37
SSH1-205ENST00000546812 MIR17HGQ75NE6 70 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 S100A7AQ86SG5 101 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 LYPD1Q8N2G4 141 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 C9orf62Q8N4C0 152 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 OR2G3Q8NGZ4 309 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 GNPNAT1Q96EK6 184 aaPredicted RBP6.52□□□□□ -1.37
SSH1-205ENST00000546812 NIPSNAP3BQ9BS92 247 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 ATG101Q9BSB4 218 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 ZNF471Q9BX82 626 aaPredicted RBP6.52□□□□□ -1.37
SSH1-205ENST00000546812 NRN1Q9NPD7 142 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 XCL2Q9UBD3 114 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 DKK2Q9UBU2 259 aa6.52□□□□□ -1.37
SSH1-205ENST00000546812 NACAE9PAV3 2078 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 ZNF705FA8MVS1 300 aaPredicted RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 SNRPCP09234 159 aaKnown RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 ZNF705DP0CH99 300 aaPredicted RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 ZNF705BP0CI00 300 aaPredicted RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 RPL7P18124 248 aaKnown RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 ACOT6Q3I5F7 207 aaPredicted RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 FAM222AQ5U5X8 452 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 Q5VSD8 79 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 FAM78BQ5VT40 261 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 C15orf53Q8NAA6 179 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 DCANP1Q8TF63 244 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 C18orf15Q96N68 181 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 GPR82Q96P67 336 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 SLC25A2Q9BXI2 301 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 MRPL32Q9BYC8 188 aaKnown RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 SEPSECSQ9HD40 501 aaKnown RBP6.51□□□□□ -1.37
SSH1-205ENST00000546812 FUT9Q9Y231 359 aa6.51□□□□□ -1.37
SSH1-205ENST00000546812 A0A087X0K7 114 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 H3BTX0 84 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 BOLA2-SMG1P6H3BVE0 249 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 SOCS3O14543 225 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 MRPS12O15235 138 aaKnown RBP6.5□□□□□ -1.37
SSH1-205ENST00000546812 PYYP10082 97 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 BTF3P20290 206 aaKnown RBP6.5□□□□□ -1.37
SSH1-205ENST00000546812 M6PRP20645 277 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 RHOBP62745 196 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 BPIFA4PQ86YQ2 179 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 OR10G4Q8NGN3 311 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 OR10G9Q8NGN4 311 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 OR10G7Q8NGN6 311 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 FRZBQ92765 325 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 C17orf77Q96MU5 243 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 RNF24Q9Y225 148 aa6.5□□□□□ -1.37
SSH1-205ENST00000546812 H3BMM0 161 aa6.49□□□□□ -1.37
SSH1-205ENST00000546812 SLC17A3O00476 420 aa6.49□□□□□ -1.37
SSH1-205ENST00000546812 OR7C2O60412 319 aa6.49□□□□□ -1.37
SSH1-205ENST00000546812 IGLC2P0DOY2 106 aa6.49□□□□□ -1.37
SSH1-205ENST00000546812 TPT1P13693 172 aaKnown RBP6.49□□□□□ -1.37
SSH1-205ENST00000546812 CDC34P49427 236 aaPredicted RBP6.49□□□□□ -1.37
SSH1-205ENST00000546812 MEOX2P50222 304 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms