RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, human

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLSTN3-215	ENST00000544584		K7EQM0	130 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	OR7C2	O60412	319 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	CCNK	O75909	580 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SIX6	O95475	246 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	NMB	P08949	121 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	GIG44	P09565	113 aa	Predicted RBP	4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ZNF705D	P0CH99	300 aa	Predicted RBP	4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ZNF705B	P0CI00	300 aa	Predicted RBP	4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584		P0DMU3	169 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FAM231A	P0DMU4	169 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FAM231C	P0DMU5	169 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	C4BPB	P20851	252 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	EMP1	P54849	157 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	NHLH2	Q02577	135 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ARL16	Q0P5N6	197 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	PATE2	Q6UY27	113 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	PQLC2	Q6ZP29	291 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TMEM182	Q6ZP80	229 aa	Predicted RBP	4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RNF182	Q8N6D2	247 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	C15orf53	Q8NAA6	179 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ZNF680	Q8NEM1	530 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	OR11H7	Q8NGC8	314 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	CMTM2	Q8TAZ6	248 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TMEM37	Q8WXS4	190 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ODF3	Q96PU9	254 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	PAXX	Q9BUH6	204 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	WDR61	Q9GZS3	305 aa	Known RBP	4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	OR51M1	Q9H341	326 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FUT9	Q9Y231	359 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	HSPB11	Q9Y547	144 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584		X6R8D5	127 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	HERC1	Q15751	4861 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	AGRN	O00468	2067 aa		4.06	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TRBV7-9	A0A0J9YWB2	115 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584		A8MTW9	85 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SNURFL	B1AK76	121 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584		F6UB75	175 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	DEFB4A	O15263	64 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SLC25A5	P05141	298 aa	Known RBP	4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	GPX1	P07203	203 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	NBEAP1	P0C6P0	100 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	IGLC2	P0DOY2	106 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	HTN1	P15515	57 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	M6PR	P20645	277 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	H2BFS	P57053	126 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FXYD7	P58549	80 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SERF2	P84101	59 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SPINK13	Q1W4C9	94 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FFAR4	Q5NUL3	377 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	BLNK	Q8WV28	456 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	LINC00476	Q8WZB0	136 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	PYGO2	Q9BRQ0	406 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SLC35B3	Q9H1N7	401 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	MBD2	Q9UBB5	411 aa		4.05	□□□□□ -1.76
CLSTN3-215	ENST00000544584	IGHV4-4	A0A075B6R2	117 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SERTM2	A0A1B0GWG4	89 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RBAKDN	A6NC62	111 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584		M0R2Z0	102 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TAAR5	O14804	337 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	GIP	P09681	153 aa	Predicted RBP	4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RBMY1A1	P0DJD3	496 aa	Known RBP	4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RBMY1C	P0DJD4	496 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FAM3B	P58499	235 aa	Predicted RBP	4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	IFITM3	Q01628	133 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RBMY1F	Q15415	496 aa	Known RBP	4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SOHLH1	Q5JUK2	328 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	GDF5OS	Q5U4N7	250 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FAM222A	Q5U5X8	452 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584		Q6ZTC4	211 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	UBE2DNL	Q8IWF7	75 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RPP25L	Q8N5L8	163 aa	Known RBP	4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ARL6IP6	Q8N6S5	226 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TMEM263	Q8WUH6	116 aa	Known RBP	4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RNF141	Q8WVD5	230 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	C20orf173	Q96LM9	149 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ARPC5L	Q9BPX5	153 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	NDFIP1	Q9BT67	221 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	NKX6-2	Q9C056	277 aa	Predicted RBP	4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	C11orf1	Q9H5F2	150 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	OR5AC2	Q9NZP5	309 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	DKK2	Q9UBU2	259 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ALG5	Q9Y673	324 aa		4.04	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TRAV12-2	A0A075B6T6	113 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	TRAV8-2	A0A0B4J237	113 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	FBLL1	A6NHQ2	334 aa	Known RBP	4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	CBY3	A6NI87	242 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	RGS13	O14921	159 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ATP5G1	P05496	136 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	HTN3	P15516	51 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ATP5G3	P48201	142 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	EIF5A	P63241	154 aa	Known RBP	4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	UBE2L3	P68036	154 aa	Known RBP	4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	SLA	Q13239	276 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	ICAM4	Q14773	271 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	C12orf74	Q32Q52	190 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	IGFL4	Q6B9Z1	124 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	AMTN	Q6UX39	209 aa		4.03	□□□□□ -1.76
CLSTN3-215	ENST00000544584	BAP18	Q8IXM2	172 aa		4.03	□□□□□ -1.76

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