RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 S100A10P60903 97 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
RTN3-213ENST00000543552 ODF3Q96PU9 254 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 WDR83OSQ9Y284 106 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 PCLOQ9Y6V0 5065 aa9.24□□□□□ -0.93
RTN3-213ENST00000543552 PKD1P98161 4303 aa9.23□□□□□ -0.93
RTN3-213ENST00000543552 ZNF253O75346 499 aa9.23□□□□□ -0.93
RTN3-213ENST00000543552 RPL29P47914 159 aaKnown RBP9.23□□□□□ -0.93
RTN3-213ENST00000543552 SULT1A1P50225 295 aa9.23□□□□□ -0.93
RTN3-213ENST00000543552 BAXQ07812 192 aa9.23□□□□□ -0.93
RTN3-213ENST00000543552 VWC2Q2TAL6 325 aa9.23□□□□□ -0.93
RTN3-213ENST00000543552 SEC22CQ9BRL7 303 aa9.23□□□□□ -0.93
RTN3-213ENST00000543552 NOP10Q9NPE3 64 aaKnown RBP9.23□□□□□ -0.93
RTN3-213ENST00000543552 LYRM2Q9NU23 88 aaPredicted RBP9.23□□□□□ -0.93
RTN3-213ENST00000543552 UBE2L5PA0A1B0GUS4 154 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 FAM240BA0A1B0GVZ2 78 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 SNURFLB1AK76 121 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 SLC17A3O00476 420 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 MPDU1O75352 247 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 SNRPCP09234 159 aaKnown RBP9.22□□□□□ -0.93
RTN3-213ENST00000543552 H2AFB2P0C5Z0 115 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 CLINT1Q14677 625 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 FCN2Q15485 313 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 ATP6V1FQ16864 119 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 GFI1BQ5VTD9 330 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 MIC13Q5XKP0 118 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 MZT2BQ6NZ67 158 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 MRPL53Q96EL3 112 aaKnown RBP9.22□□□□□ -0.93
RTN3-213ENST00000543552 SLC39A9Q9NUM3 307 aa9.22□□□□□ -0.93
RTN3-213ENST00000543552 NACAE9PAV3 2078 aa9.21□□□□□ -0.93
RTN3-213ENST00000543552 FAM24AA6NFZ4 105 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 NPIPB6E9PJ23 425 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 H3BQ15 152 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 H3BTX0 84 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 RLN2P04090 185 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 MORN5Q5VZ52 161 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 LINC00299Q6ZSB3 139 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 CHAC2Q8WUX2 184 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 SAT2Q96F10 170 aaPredicted RBP9.21□□□□□ -0.94
RTN3-213ENST00000543552 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 PRELID1Q9Y255 219 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 DNAH11Q96DT5 4516 aa9.21□□□□□ -0.94
RTN3-213ENST00000543552 NBDYA0A0U1RRE5 68 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 PRAC2D3DTV9 90 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 M6PRP20645 277 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 FGF7P21781 194 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 PDE6HQ13956 83 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 TMEM252Q8N6L7 170 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 ZNRF2Q8NHG8 242 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 RNF141Q8WVD5 230 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 ZNF503Q96F45 646 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 C11orf1Q9H5F2 150 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 GPN1Q9HCN4 374 aaPredicted RBP9.2□□□□□ -0.94
RTN3-213ENST00000543552 KCNIP2Q9NS61 270 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 TMEM14CQ9P0S9 112 aa9.2□□□□□ -0.94
RTN3-213ENST00000543552 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 IGSF23A1L1A6 192 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 SLC25A5P05141 298 aaKnown RBP9.19□□□□□ -0.94
RTN3-213ENST00000543552 PRB4P10163 310 aaPredicted RBP9.19□□□□□ -0.94
RTN3-213ENST00000543552 OR5I1Q13606 314 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 RAB32Q13637 225 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 ZNF680Q8NEM1 530 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 S100ZQ8WXG8 99 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 GNPNAT1Q96EK6 184 aaPredicted RBP9.19□□□□□ -0.94
RTN3-213ENST00000543552 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 AAMDCQ9H7C9 122 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 ZNF586Q9NXT0 402 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 TIMM9Q9Y5J7 89 aa9.19□□□□□ -0.94
RTN3-213ENST00000543552 TRAV5A0A0B4J249 113 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 TRAV12-3A0A0B4J271 114 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 J3KRW8 73 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 CT45A10P0DMU9 189 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 HIST1H1EP10412 219 aaKnown RBP9.18□□□□□ -0.94
RTN3-213ENST00000543552 DAZ2Q13117 558 aaKnown RBP9.18□□□□□ -0.94
RTN3-213ENST00000543552 TTC32Q5I0X7 151 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 C6orf223Q8N319 242 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 LINC00612Q8N6U2 182 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 PARD6GQ9BYG4 376 aaPredicted RBP9.18□□□□□ -0.94
RTN3-213ENST00000543552 SLC25A31Q9H0C2 315 aa9.18□□□□□ -0.94
RTN3-213ENST00000543552 DYNC1H1Q14204 4646 aaKnown RBP9.17□□□□□ -0.94
RTN3-213ENST00000543552 TRAV26-1A0A087WT03 109 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 GAGE12BA1L429 117 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 H3BNG1 76 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 GAGE7O76087 117 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 IL15RAQ13261 267 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 ASAH1Q13510 395 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 KIR3DS1Q14943 382 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 SSX7Q7RTT5 188 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 ENKURQ8TC29 256 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 RXFP4Q8TDU9 374 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 LINC00477Q96M19 166 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 NPCDR1Q9BY65 106 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
RTN3-213ENST00000543552 C7orf71A4D174 169 aa9.16□□□□□ -0.94
RTN3-213ENST00000543552 E5RGE8 158 aa9.16□□□□□ -0.94
RTN3-213ENST00000543552 TMEM78Q5T7P6 136 aa9.16□□□□□ -0.94
RTN3-213ENST00000543552 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms