RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 EDA2RQ9HAV5 297 aa8.73□□□□□ -1.01
SRGAP1-205ENST00000542841 OTORQ9NRC9 128 aa8.73□□□□□ -1.01
SRGAP1-205ENST00000542841 ZNF586Q9NXT0 402 aa8.73□□□□□ -1.01
SRGAP1-205ENST00000542841 IGHV4OR15-8A0A075B7B6 117 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 A0A087WW49 117 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 IGHV7-4-1A0A0J9YVY3 117 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 GGTLC3B5MD39 225 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 SUMO1P63165 101 aaKnown RBP8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 SAMD13Q5VXD3 122 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 UNQ9165/PRO28630Q6UXU0 137 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 GLMPQ8WWB7 406 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 OR5B12Q96R08 314 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 PARLQ9H300 379 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 Q9H3A6 140 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 AAMDCQ9H7C9 122 aa8.72□□□□□ -1.01
SRGAP1-205ENST00000542841 SORL1Q92673 2214 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 SERTM2A0A1B0GWG4 89 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 ZNF320A2RRD8 509 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 HELTA6NFD8 242 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 ZNF727A8MUV8 499 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 H3BQ15 152 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 SAP30O75446 220 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 S100A9P06702 114 aaKnown RBP8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 KLF5Q13887 457 aaPredicted RBP8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 SIGLEC15Q6ZMC9 328 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 OR1N2Q8NGR9 330 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 BLNKQ8WV28 456 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 SMIM7Q9BQ49 75 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 PEMTQ9UBM1 199 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 NAT8Q9UHE5 227 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 SMPXQ9UHP9 88 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 PRELID1Q9Y255 219 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 LY96Q9Y6Y9 160 aa8.71□□□□□ -1.02
SRGAP1-205ENST00000542841 PGPA6NDG6 321 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 FBLL1A6NHQ2 334 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 C9JCJ5 164 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 NDUFB4O95168 129 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 TAS2R60P59551 318 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 RANP62826 216 aaKnown RBP8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 CMTM2Q8TAZ6 248 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 C2CD4CQ8TF44 421 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 TVP23CQ96ET8 276 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 ATG101Q9BSB4 218 aa8.7□□□□□ -1.02
SRGAP1-205ENST00000542841 IGHV3OR16-8A0A075B7F1 116 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 SCO2A0A1W2PP80 73 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 TMEM213A2RRL7 107 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 ZNF785A8K8V0 405 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 B4DEV8 164 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 K7EQM0 130 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 PEX7O00628 323 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 OVOL1O14753 267 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 CHEK1O14757 476 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 SLC25A5P05141 298 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 AKR1C3P42330 323 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 CNN1P51911 297 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 CEBPGP53567 150 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 RHEBQ15382 184 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 TMEM241Q24JQ0 296 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 MRPL53Q96EL3 112 aaKnown RBP8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 SMIM12Q96EX1 92 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 RHPN1-AS1Q9BWJ2 59 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 EPDR1Q9UM22 224 aa8.69□□□□□ -1.02
SRGAP1-205ENST00000542841 TRBV6-1A0A0K0K1D8 114 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 ZNF207O43670 478 aaKnown RBP8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 APOHP02749 345 aaPredicted RBP8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 IGHV4-30-4P0DP06 118 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 CSN1S1P47710 185 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 GUCA2BQ16661 112 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 CLRN3Q8NCR9 226 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 FMC1Q96HJ9 113 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 SDF2L1Q9HCN8 221 aa8.68□□□□□ -1.02
SRGAP1-205ENST00000542841 TCRAP04437 139 aa8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 RPL35P42766 123 aaKnown RBP8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 SYNJ2BPP57105 145 aa8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 TMEM183BQ1AE95 376 aa8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 ZNF674Q2M3X9 581 aa8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 TM4SF20Q53R12 229 aa8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 SPATA25Q9BR10 227 aa8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 KLF12Q9Y4X4 402 aa8.67□□□□□ -1.02
SRGAP1-205ENST00000542841 A0A087WWC5 75 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 C2orf70A6NJV1 201 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 M0R036 132 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 SLC17A3O00476 420 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 UBE2G1P62253 170 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 EXOC3-AS1Q8N2X6 119 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 TMEM75Q8N9X5 138 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 OR9G4Q8NGQ1 327 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 IL17DQ8TAD2 202 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 C17orf77Q96MU5 243 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 NRN1Q9NPD7 142 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 SIGLEC8Q9NYZ4 499 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 MLXQ9UH92 298 aa8.66□□□□□ -1.02
SRGAP1-205ENST00000542841 IGHV3OR16-13A0A075B7E8 117 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 IGHV3-49A0A0A0MS15 119 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 IGHV3-74A0A0B4J1X5 117 aa8.65□□□□□ -1.02
SRGAP1-205ENST00000542841 TRAV2A0A0B4J234 112 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms