RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 OR2T8A6NH00 312 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 NDUFA4O00483 81 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 ISLRO14498 428 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 AMY1AP04745 511 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 S100A6P06703 90 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 ELANEP08246 267 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 GPR183P32249 361 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 TPPP2P59282 170 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 RANP62826 216 aaKnown RBP6.43□□□□□ -1.38
CHD4-208ENST00000540960 LY6EQ16553 131 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 FAM106AQ4KMX7 169 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 BAGE2Q86Y30 109 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 FAM24BQ8N5W8 94 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 C2CD4CQ8TF44 421 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 ZNF503Q96F45 646 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 FAM210BQ96KR6 192 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 RCHY1Q96PM5 261 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 SLC50A1Q9BRV3 221 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 GNB4Q9HAV0 340 aa6.43□□□□□ -1.38
CHD4-208ENST00000540960 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.42□□□□□ -1.38
CHD4-208ENST00000540960 GGTLC3B5MD39 225 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 GGCTO75223 188 aaKnown RBP6.42□□□□□ -1.38
CHD4-208ENST00000540960 GCGP01275 180 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 IGLV1-40P01703 118 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 IGHG4P01861 327 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 PYYP10082 97 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 PF4V1P10720 104 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 CD28P10747 220 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 PPIFP30405 207 aaKnown RBP6.42□□□□□ -1.38
CHD4-208ENST00000540960 ARL3P36405 182 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 MYCNOSP40205 109 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 FAM3BP58499 235 aaPredicted RBP6.42□□□□□ -1.38
CHD4-208ENST00000540960 ERVFC1-1P60608 527 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 FOXE3Q13461 319 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 PLECQ15149 4684 aaKnown RBP6.42□□□□□ -1.38
CHD4-208ENST00000540960 CENPWQ5EE01 88 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 TCTEX1D4Q5JR98 221 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 SAPCD1Q5SSQ6 148 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 TEX38Q6PEX7 206 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 FAM231DQ6ZW35 169 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 KLHDC1Q8N7A1 406 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 BLNKQ8WV28 456 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 DAZAP1Q96EP5 407 aaKnown RBP6.42□□□□□ -1.38
CHD4-208ENST00000540960 Q9H3A6 140 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 TNCP24821 2201 aa6.42□□□□□ -1.38
CHD4-208ENST00000540960 A0A087X0K7 114 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 ZNF785A8K8V0 405 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 G3V318 75 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 K7EMT4 169 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 TCRAP04437 139 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 IGLC2P0DOY2 106 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 RPS10P46783 165 aaKnown RBP6.41□□□□□ -1.38
CHD4-208ENST00000540960 KIAA0141Q14154 515 aaPredicted RBP6.41□□□□□ -1.38
CHD4-208ENST00000540960 ELOBQ15370 118 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 TOMM20LQ6UXN7 152 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 CLEC19AQ6UXS0 136 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 OCC1Q8TAD7 63 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 MRPL53Q96EL3 112 aaKnown RBP6.41□□□□□ -1.38
CHD4-208ENST00000540960 MS4A10Q96PG2 267 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 PYGO2Q9BRQ0 406 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 NDFIP1Q9BT67 221 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 SRD5A3Q9H8P0 318 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 UFC1Q9Y3C8 167 aa6.41□□□□□ -1.38
CHD4-208ENST00000540960 XKRY2A2RUG3 117 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 FAM231BA6NCW3 169 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 F8W735 103 aaPredicted RBP6.4□□□□□ -1.38
CHD4-208ENST00000540960 EIF3GO75821 320 aaKnown RBP eCLIP6.4□□□□□ -1.38
CHD4-208ENST00000540960 MT-ND6P03923 174 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 TYMSP04818 313 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 CT45A10P0DMU9 189 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 ADMP35318 185 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 USF2Q15853 346 aaPredicted RBP6.4□□□□□ -1.38
CHD4-208ENST00000540960 RPEL1Q2QD12 228 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 CT83Q5H943 113 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 WDR73Q6P4I2 378 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 RASL11AQ6T310 242 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 C19orf35Q6ZS72 473 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 TMEM75Q8N9X5 138 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 OR4B1Q8NGF8 309 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 ZNF414Q96IQ9 312 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 CITED2Q99967 270 aaPredicted RBP6.4□□□□□ -1.38
CHD4-208ENST00000540960 IL36BQ9NZH7 164 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 ZNF492Q9P255 531 aa6.4□□□□□ -1.38
CHD4-208ENST00000540960 PEF1Q9UBV8 284 aaKnown RBP6.4□□□□□ -1.38
CHD4-208ENST00000540960 ALMS1Q8TCU4 4167 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 RBAKDNA6NC62 111 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 A8MWL6 223 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 BUB3O43684 328 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 S100A8P05109 93 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 PFN1P07737 140 aaKnown RBP6.39□□□□□ -1.39
CHD4-208ENST00000540960 MGST1P10620 155 aaKnown RBP6.39□□□□□ -1.39
CHD4-208ENST00000540960 CFHR3Q02985 330 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 IBA57Q5T440 356 aaKnown RBP6.39□□□□□ -1.39
CHD4-208ENST00000540960 MORN5Q5VZ52 161 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 GPHB5Q86YW7 130 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 TMEM183AQ8IXX5 376 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 Q8N2B8 174 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 OR4X2Q8NGF9 303 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 IGF2BP2-AS1Q96M15 143 aa6.39□□□□□ -1.39
CHD4-208ENST00000540960 CCDC140Q96MF4 163 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms