RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 LINC00052Q96N35 136 aa6.37□□□□□ -1.39
TRAPPC1-202ENST00000540486 ATP5SQ99766 215 aa6.37□□□□□ -1.39
TRAPPC1-202ENST00000540486 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
TRAPPC1-202ENST00000540486 HRH4Q9H3N8 390 aa6.37□□□□□ -1.39
TRAPPC1-202ENST00000540486 A0A087X0K7 114 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 F6UB75 175 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 H3BMM0 161 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 H3BQ15 152 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 SMLR1H3BR10 107 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 ISLRO14498 428 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 COX7A2P2O60397 106 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 HLA-DMBP28068 263 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 S100A7P31151 101 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 ID1P41134 155 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 PSMB3P49720 205 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 FGL1Q08830 312 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 STHQ8IWL8 128 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 OR1L4Q8NGR5 311 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 OR2T35Q8NGX2 323 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 ASB13Q8WXK3 278 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 SAT2Q96F10 170 aaPredicted RBP6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 C16orf92Q96LL3 132 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 AQP10Q96PS8 301 aa6.36□□□□□ -1.39
TRAPPC1-202ENST00000540486 TRAV10A0A0B4J240 114 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 RNF222A6NCQ9 220 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 H3BTX0 84 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 RBMY1CP0DJD4 496 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 IGLC2P0DOY2 106 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 C4BPBP20851 252 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 MEOX2P50222 304 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 FAM78BQ5VT40 261 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 SPATA31B1PQ5VZV4 182 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 Q6ZNX1 250 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 RNF182Q8N6D2 247 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 CSNK1G2-AS1Q8NCQ2 148 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 FAM167A-AS1Q96KT0 104 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 PFDN5Q99471 154 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 PARD6GQ9BYG4 376 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 SAV1Q9H4B6 383 aaPredicted RBP6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 ZNF586Q9NXT0 402 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 TNFSF18Q9UNG2 199 aa6.35□□□□□ -1.39
TRAPPC1-202ENST00000540486 FLG2Q5D862 2391 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 A0A0J9YX75 114 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 IFNA5P01569 189 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 ZNF705DP0CH99 300 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 ZNF705BP0CI00 300 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 HLA-DRB4P13762 266 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 SUMO1P63165 101 aaKnown RBP6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 SERTAD4-AS1Q5TG53 156 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 FOXI2Q6ZQN5 318 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 MIR17HGQ75NE6 70 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 S100A7AQ86SG5 101 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 BPIFA4PQ86YQ2 179 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 ZNF709Q8N972 641 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 OR11H2Q8NH07 326 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 SCGB1C1Q8TD33 95 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 SLC25A2Q9BXI2 301 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 ZNF331Q9NQX6 463 aaPredicted RBP6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 RNF24Q9Y225 148 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 HLA-DRB4X5D2U9 266 aa6.34□□□□□ -1.39
TRAPPC1-202ENST00000540486 IGLV2-18A0A075B6J9 118 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 FXYD6-FXYD2A0A087WZ82 144 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 A8MTW9 85 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 ZNF705FA8MVS1 300 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 NPIPB6E9PJ23 425 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 C17orf112F2Z3M2 114 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 SLC17A3O00476 420 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 NDUFB4O95168 129 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 CA1P00915 261 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 IGKV3-20P01619 116 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 AMBPP02760 352 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 PYYP10082 97 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 LINC00310P59036 64 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 PSG3Q16557 428 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 KRTAP19-4Q3LI73 84 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 FFAR4Q5NUL3 377 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 SAMD13Q5VXD3 122 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 MORN3Q6PF18 240 aaPredicted RBP6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 OR11H4Q8NGC9 324 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 ZNF503Q96F45 646 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 CLUHP3Q96NS8 147 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 RPRMQ9NS64 109 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 CLEC5AQ9NY25 188 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 TMEM14CQ9P0S9 112 aa6.33□□□□□ -1.4
TRAPPC1-202ENST00000540486 PRAC2D3DTV9 90 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 EIF3GO75821 320 aaKnown RBP eCLIP6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 HIST1H1EP10412 219 aaKnown RBP6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 SPP1P10451 314 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 CXCL2P19875 107 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 ATP6V0CP27449 155 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 FXYD7P58549 80 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 RPL7L1Q6DKI1 246 aaKnown RBP6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 AMTNQ6UX39 209 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 INO80EQ8NBZ0 244 aaPredicted RBP6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 OR4B1Q8NGF8 309 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 LRRC20Q8TCA0 184 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 NDUFAF3Q9BU61 184 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 SLC35B3Q9H1N7 401 aa6.32□□□□□ -1.4
TRAPPC1-202ENST00000540486 CYTL1Q9NRR1 136 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms