RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 ZNF253O75346 499 aa8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 INSL3P51460 131 aa8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 CD300EQ496F6 205 aaPredicted RBP8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SOHLH1Q5JUK2 328 aa8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 RPUSD4Q96CM3 377 aaKnown RBP8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ZNF331Q9NQX6 463 aaPredicted RBP8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 EPDR1Q9UM22 224 aa8.06□□□□□ -1.12
TNFRSF1A-211ENST00000538363 FBN1P35555 2871 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ZNF727A8MUV8 499 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SLC17A3O00476 420 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 PEX7O00628 323 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 MRPS12O15235 138 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 S100A9P06702 114 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SRP19P09132 144 aaKnown RBP8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ZNF688P0C7X2 276 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 GNG5P63218 68 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 PSG3Q16557 428 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 PSMG4Q5JS54 123 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 EBLN2Q6P2I7 272 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 GOLT1AQ6ZVE7 132 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 TMEM61Q8N0U2 210 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 RNF182Q8N6D2 247 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 OR2K2Q8NGT1 345 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 HIST1H2BAQ96A08 127 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 TCEAL7Q9BRU2 100 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SIGLEC8Q9NYZ4 499 aa8.05□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SCO2A0A1W2PP80 73 aa8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 TMEM250H0YL14 139 aa8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 NDUFB4O95168 129 aa8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SFTA3P0C7M3 94 aa8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SRSF3P84103 164 aaKnown RBP8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SPAG8Q99932 426 aaPredicted RBP8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ATG101Q9BSB4 218 aa8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 NDFIP1Q9BT67 221 aa8.04□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SERTM2A0A1B0GWG4 89 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ZNF705FA8MVS1 300 aaPredicted RBP8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 GGTLC3B5MD39 225 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 K7EQG2 157 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 HLA-DMBP28068 263 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 CD81P60033 236 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 FAM74A3Q4VXF1 159 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 TMEM78Q5T7P6 136 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 FAM90A2PQ658T7 463 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ADAMTSL5Q6ZMM2 481 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 EIF4E3Q8N5X7 224 aaKnown RBP8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 CYB561D1Q8N8Q1 229 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 SMIM7Q9BQ49 75 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 ZMAT5Q9UDW3 170 aaKnown RBP8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 DNHD1Q96M86 4753 aa8.03□□□□□ -1.12
TNFRSF1A-211ENST00000538363 STAB1Q9NY15 2570 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 WNK1Q9H4A3 2382 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TRAV2A0A0B4J234 112 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TMEM218A2RU14 115 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 KRBOX1C9JBD0 128 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 DIRC3C9JPN6 131 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 M0R3E3 92 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 IGLV1-51P01701 117 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TCRAP04437 139 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 MGST1P10620 155 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 IGLL1P15814 213 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 GNG4P50150 75 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 DEFB131AP59861 70 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 HIST1H1AQ02539 215 aaPredicted RBP8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 PRR31Q5SQ13 230 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 PRNTQ86SH4 94 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 GTSCR1Q86UQ5 136 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 MRPL53Q96EL3 112 aaKnown RBP8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 SGK494Q96LW2 274 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 NIPSNAP3BQ9BS92 247 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.13
TNFRSF1A-211ENST00000538363 IGKV2-40A0A087WW87 121 aaPredicted RBP8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TRAV34A0A0B4J273 112 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 FBLL1A6NHQ2 334 aaKnown RBP8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 OR11H12B2RN74 326 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 M0R036 132 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 DUSP14O95147 198 aaKnown RBP8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 IGKV2D-40P01614 121 aaPredicted RBP8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 PRB4P10163 310 aaPredicted RBP8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TMEM241Q24JQ0 296 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 BAGE2Q86Y30 109 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 ARL6IP6Q8N6S5 226 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 OR4B1Q8NGF8 309 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 FMC1Q96HJ9 113 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 PARLQ9H300 379 aa8.01□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TRAV8-2A0A0B4J237 113 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 IZUMO1RA6ND01 250 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 NDUFS6O75380 124 aaKnown RBP8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 APOC3P02656 99 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 S100A1P23297 94 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 RPL35P42766 123 aaKnown RBP8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 TAS2R60P59551 318 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 FLI1Q01543 452 aaPredicted RBP8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 CCDC28AQ8IWP9 274 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 DCANP1Q8TF63 244 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 DAZAP1Q96EP5 407 aaKnown RBP8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 C20orf173Q96LM9 149 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 BIN3Q9NQY0 253 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 PSG8Q9UQ74 426 aa8□□□□□ -1.13
TNFRSF1A-211ENST00000538363 C9JQL5 133 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms