RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 GAGE12GP0CL81 117 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 GAGE12IP0CL82 117 aa14.62□□□□□ -0.07
SFSWAP-203ENST00000535236 COLCA2A8K830 154 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 LOC105371267A0A1B0GV96 52 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 PFN1P07737 140 aaKnown RBP14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 PMVKQ15126 192 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 IGFL3Q6UXB1 125 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 C3orf79P0CE67 100 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 OCIAD2Q56VL3 154 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 TMEM256Q8N2U0 113 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 PAX9P55771 341 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 TCTEX1D4Q5JR98 221 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 Q6ZRM9 215 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 TP53TG1Q9Y2A0 90 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 SCN5AQ14524 2016 aa14.61□□□□□ -0.07
SFSWAP-203ENST00000535236 A0A087X0K7 114 aa14.6□□□□□ -0.07
SFSWAP-203ENST00000535236 IGHV1OR15-1A0A075B7D0 117 aa14.6□□□□□ -0.07
SFSWAP-203ENST00000535236 ZNF114Q8NC26 417 aa14.6□□□□□ -0.07
SFSWAP-203ENST00000535236 LINC00479Q96M42 142 aa14.6□□□□□ -0.07
SFSWAP-203ENST00000535236 I3L3M4 83 aa14.6□□□□□ -0.07
SFSWAP-203ENST00000535236 RMI2Q96E14 147 aa14.6□□□□□ -0.07
SFSWAP-203ENST00000535236 CNOT1A5YKK6 2376 aaKnown RBP14.6□□□□□ -0.07
SFSWAP-203ENST00000535236 C8orf49Q96NF6 230 aa14.59□□□□□ -0.07
SFSWAP-203ENST00000535236 HS3ST6Q96QI5 342 aa14.59□□□□□ -0.07
SFSWAP-203ENST00000535236 ZFAND6Q6FIF0 208 aa14.59□□□□□ -0.07
SFSWAP-203ENST00000535236 NDUFA4O00483 81 aa14.59□□□□□ -0.07
SFSWAP-203ENST00000535236 CGB7P0DN87 165 aa14.59□□□□□ -0.07
SFSWAP-203ENST00000535236 GAGE2AQ6NT46 116 aa14.59□□□□□ -0.07
SFSWAP-203ENST00000535236 ZNF833PQ6ZTB9 187 aa14.59□□□□□ -0.07
SFSWAP-203ENST00000535236 EDA2RQ9HAV5 297 aa14.58□□□□□ -0.07
SFSWAP-203ENST00000535236 FREM3P0C091 2139 aa14.58□□□□□ -0.07
SFSWAP-203ENST00000535236 C1orf194Q5T5A4 169 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 NDUFA4L2Q9NRX3 87 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 TRPM7Q96QT4 1865 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 NEGR1Q7Z3B1 354 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 THAP8Q8NA92 274 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 TMEM141Q96I45 108 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 CHAC1Q9BUX1 264 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 TMEM14BQ9NUH8 114 aa14.58□□□□□ -0.08
SFSWAP-203ENST00000535236 DOPEY2Q9Y3R5 2298 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 TMEM213A2RRL7 107 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 PFN2P35080 140 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 C8orf86Q6ZUL3 223 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 ZNF492Q9P255 531 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 TMEM243Q9BU79 118 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 SPTBN2O15020 2390 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 LMO1P25800 156 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 ZNRF2Q8NHG8 242 aa14.57□□□□□ -0.08
SFSWAP-203ENST00000535236 HOXD3P31249 432 aaPredicted RBP14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 CDKN1BP46527 198 aa14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 GAGE6Q13070 117 aa14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 VWC2Q2TAL6 325 aa14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 PRSS46E5RG02 174 aa14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 LOXP28300 417 aaPredicted RBP14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 LURAP1LQ8IV03 231 aa14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 ZMAT4Q9H898 229 aa14.56□□□□□ -0.08
SFSWAP-203ENST00000535236 TRBV19A0A075B6N1 114 aa14.55□□□□□ -0.08
SFSWAP-203ENST00000535236 RBMY1FQ15415 496 aaKnown RBP14.55□□□□□ -0.08
SFSWAP-203ENST00000535236 TRAV12-2A0A075B6T6 113 aa14.55□□□□□ -0.08
SFSWAP-203ENST00000535236 KIR3DS1Q14943 382 aa14.55□□□□□ -0.08
SFSWAP-203ENST00000535236 C2orf66Q6UXQ4 117 aa14.55□□□□□ -0.08
SFSWAP-203ENST00000535236 Q6ZR03 302 aa14.55□□□□□ -0.08
SFSWAP-203ENST00000535236 IGKV1-6A0A0C4DH72 117 aa14.54□□□□□ -0.08
SFSWAP-203ENST00000535236 MPV17L2Q567V2 206 aa14.54□□□□□ -0.08
SFSWAP-203ENST00000535236 REG4Q9BYZ8 158 aa14.54□□□□□ -0.08
SFSWAP-203ENST00000535236 NCOR1P1Q9H4R4 102 aa14.54□□□□□ -0.08
SFSWAP-203ENST00000535236 LYL1P12980 280 aa14.53□□□□□ -0.08
SFSWAP-203ENST00000535236 IGHV3-38A0A0C4DH36 116 aa14.53□□□□□ -0.08
SFSWAP-203ENST00000535236 SUMO4Q6EEV6 95 aa14.53□□□□□ -0.08
SFSWAP-203ENST00000535236 C17orf58Q2M2W7 97 aa14.53□□□□□ -0.08
SFSWAP-203ENST00000535236 DUX4L9Q6RFH8 374 aaPredicted RBP14.53□□□□□ -0.08
SFSWAP-203ENST00000535236 ANXA2RQ3ZCQ2 193 aa14.53□□□□□ -0.08
SFSWAP-203ENST00000535236 Q8N8P6 123 aa14.53□□□□□ -0.08
SFSWAP-203ENST00000535236 KLF5Q13887 457 aaPredicted RBP14.52□□□□□ -0.08
SFSWAP-203ENST00000535236 C9JAW5 83 aa14.52□□□□□ -0.09
SFSWAP-203ENST00000535236 XIRP1Q702N8 1843 aaKnown RBP14.52□□□□□ -0.09
SFSWAP-203ENST00000535236 SDHAF1A6NFY7 115 aa14.52□□□□□ -0.09
SFSWAP-203ENST00000535236 H3BMM0 161 aa14.52□□□□□ -0.09
SFSWAP-203ENST00000535236 TEX36Q5VZQ5 186 aa14.52□□□□□ -0.09
SFSWAP-203ENST00000535236 ELANEP08246 267 aa14.51□□□□□ -0.09
SFSWAP-203ENST00000535236 FAM104BQ5XKR9 115 aa14.51□□□□□ -0.09
SFSWAP-203ENST00000535236 LINC00311Q8N616 119 aa14.51□□□□□ -0.09
SFSWAP-203ENST00000535236 FAM231BA6NCW3 169 aa14.51□□□□□ -0.09
SFSWAP-203ENST00000535236 NXPH4O95158 308 aa14.51□□□□□ -0.09
SFSWAP-203ENST00000535236 MYO7BQ6PIF6 2116 aa14.51□□□□□ -0.09
SFSWAP-203ENST00000535236 SOCS3O14543 225 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 SPTBN1Q01082 2364 aaKnown RBP14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 IGLV3-9A0A075B6K5 115 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 LHBP01229 141 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 STPG4Q8N801 248 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 IGF2BP2-AS1Q96M15 143 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 A0A096LPF7 62 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 HLA-DRB4P13762 266 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 HLA-DRB4X5D2U9 266 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 H3BRN7 92 aa14.5□□□□□ -0.09
SFSWAP-203ENST00000535236 ACACAQ13085 2346 aa14.49□□□□□ -0.09
SFSWAP-203ENST00000535236 COL6A6A6NMZ7 2263 aa14.49□□□□□ -0.09
SFSWAP-203ENST00000535236 LY6G6EA0A0G2JKS1 128 aa14.49□□□□□ -0.09
SFSWAP-203ENST00000535236 CT83Q5H943 113 aa14.49□□□□□ -0.09
SFSWAP-203ENST00000535236 U3KQA8 63 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 623.3 ms