RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 CELA1Q9UNI1 258 aa6.45□□□□□ -1.38
CCDC90B-219ENST00000534753 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 ZNF705EA8MWA4 302 aaPredicted RBP6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 M0R2Z0 102 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 PRAF2O60831 178 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 CNN1P51911 297 aaKnown RBP6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 PLP1P60201 277 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 CLINT1Q14677 625 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 SPINK13Q1W4C9 94 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 PXDC1Q5TGL8 231 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 SPATA31B1PQ5VZV4 182 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 ZNF709Q8N972 641 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 THAP6Q8TBB0 222 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 C2CD4CQ8TF44 421 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 TMEM37Q8WXS4 190 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 LINC00476Q8WZB0 136 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 MLST8Q9BVC4 326 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 C11orf1Q9H5F2 150 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 DNAJC4Q9NNZ3 241 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 OR5AC2Q9NZP5 309 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 GOLT1BQ9Y3E0 138 aa6.44□□□□□ -1.38
CCDC90B-219ENST00000534753 TRAV12-2A0A075B6T6 113 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 ZNF705FA8MVS1 300 aaPredicted RBP6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 TIRAPP58753 221 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 B2MP61769 119 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 IL15RAQ13261 267 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 OPCMLQ14982 345 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 PSG3Q16557 428 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 MORN5Q5VZ52 161 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 Q6ZTC4 211 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 BPIFA4PQ86YQ2 179 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 OR5C1Q8NGR4 320 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 OR1L4Q8NGR5 311 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 SLC25A31Q9H0C2 315 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 SLC39A9Q9NUM3 307 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 RNF24Q9Y225 148 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 WDR83OSQ9Y284 106 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 PXMP4Q9Y6I8 212 aa6.43□□□□□ -1.38
CCDC90B-219ENST00000534753 LYSTQ99698 3801 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 E5RGE8 158 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 HBE1P02100 147 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 PRM2P04554 102 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 HTN1P15515 57 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 HTN3P15516 51 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 CXCL3P19876 107 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 CYCSP99999 105 aaKnown RBP6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 ATP6V1FQ16864 119 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 BAP18Q8IXM2 172 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 OR11H7Q8NGC8 314 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 RPUSD4Q96CM3 377 aaKnown RBP6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 PFDN5Q99471 154 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 MARVELD1Q9BSK0 173 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 NMES1Q9C002 83 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 RFNGQ9Y644 331 aa6.42□□□□□ -1.38
CCDC90B-219ENST00000534753 A0A087X0K7 114 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 DEFB131BA0A096LNP1 70 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 TRAV10A0A0B4J240 114 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 ZNF705GA8MUZ8 300 aaPredicted RBP6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 C11orf94C9JXX5 98 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 H0YIZ8 118 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 H3BQ15 152 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 J3KRW8 73 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 SLC17A3O00476 420 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 INSP01308 110 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 SPART-AS1P0CW21 52 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 RPL29P47914 159 aaKnown RBP6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 H2BFSP57053 126 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 RRN3P1Q2M238 152 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 VWC2Q2TAL6 325 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 C12orf74Q32Q52 190 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 GCSAMLQ5JQS6 135 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 LCN15Q6UWW0 184 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 ZNF705AQ6ZN79 300 aaPredicted RBP6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 C1orf158Q8N1D5 194 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 OR8A1Q8NGG7 326 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 BLNKQ8WV28 456 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 PPP1R1CQ8WVI7 109 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 LINC01587Q99440 93 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 SMIM3Q9BZL3 60 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 HRH4Q9H3N8 390 aa6.41□□□□□ -1.38
CCDC90B-219ENST00000534753 SMIM9A6NGZ8 99 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 PRAC2D3DTV9 90 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 BOLA2-SMG1P6H3BVE0 249 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 MRPS12O15235 138 aaKnown RBP6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 PYYP10082 97 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 FAM222AQ5U5X8 452 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 AMTNQ6UX39 209 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 RPP25LQ8N5L8 163 aaKnown RBP6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 OR10J6PQ8NGY7 276 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 IGF2BP2-AS1Q96M15 143 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 SLC50A1Q9BRV3 221 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 NPCDR1Q9BY65 106 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 PARD6GQ9BYG4 376 aaPredicted RBP6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 ZNF331Q9NQX6 463 aaPredicted RBP6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 YTHDF2Q9Y5A9 579 aaKnown RBP6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 TIMM9Q9Y5J7 89 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 ALG5Q9Y673 324 aa6.4□□□□□ -1.38
CCDC90B-219ENST00000534753 RYR2Q92736 4967 aa6.4□□□□□ -1.39
CCDC90B-219ENST00000534753 IGHV4-4A0A075B6R2 117 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms