RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 RITA1Q96K30 269 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 HIF1ANQ9NWT6 349 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 NHLRC4P0CG21 123 aaPredicted RBP15.19■□□□□ 0.02
SMPD1-210ENST00000534405 CCL3L1P16619 93 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 PAX8Q06710 450 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 ZFAND6Q6FIF0 208 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 ZNF562Q6V9R5 426 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 DKK2Q9UBU2 259 aa15.19■□□□□ 0.02
SMPD1-210ENST00000534405 PRRG2O14669 202 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 RIGQ13278 110 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 TAL2Q16559 108 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 CFAP126Q5VTH2 177 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 OR10X1Q8NGY0 326 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 MRPL20Q9BYC9 149 aaKnown RBP15.18■□□□□ 0.02
SMPD1-210ENST00000534405 PCNX1Q96RV3 2341 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 ATMQ13315 3056 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 ZGRF1Q86YA3 2104 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 PPIFP30405 207 aaKnown RBP15.18■□□□□ 0.02
SMPD1-210ENST00000534405 NUP37Q8NFH4 326 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 TMEM133Q9H2Q1 129 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 VCX2Q9H322 139 aa15.18■□□□□ 0.02
SMPD1-210ENST00000534405 A0A1B0GW15 77 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 HLA-DRB4P13762 266 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 SMCPP49901 116 aaPredicted RBP15.17■□□□□ 0.02
SMPD1-210ENST00000534405 HLA-DRB4X5D2U9 266 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 A0A0G2JNJ9 132 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 PRSS29PA6NIE9 313 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 FSTL3O95633 263 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 RNASE2P10153 161 aaKnown RBP15.17■□□□□ 0.02
SMPD1-210ENST00000534405 ADIPOQQ15848 244 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 ZNF833PQ6ZTB9 187 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 TTTY13Q9BZ97 58 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 ZMAT4Q9H898 229 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 Q9UFV3 132 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 GVINP1Q7Z2Y8 2422 aa15.17■□□□□ 0.02
SMPD1-210ENST00000534405 E7EUB6 86 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 COX7A2P2O60397 106 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 ATP5IP56385 69 aaPredicted RBP15.16■□□□□ 0.02
SMPD1-210ENST00000534405 C10orf113Q5VZT2 155 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 PDPNQ86YL7 162 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 OR1L4Q8NGR5 311 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 GLMPQ8WWB7 406 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 HARBI1Q96MB7 349 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 HHLA3Q9XRX5 114 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 PKDREJQ9NTG1 2253 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 ANKRD11Q6UB99 2663 aaPredicted RBP15.16■□□□□ 0.02
SMPD1-210ENST00000534405 WI2-2373I1.2A0A1W2PRP0 233 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 PGPA6NDG6 321 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 K7EMI3 77 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 NDUFS7O75251 213 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 ARMS2P0C7Q2 107 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 C2orf83Q53S99 150 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 TEX29Q8N6K0 151 aa15.16■□□□□ 0.02
SMPD1-210ENST00000534405 COL8A1P27658 744 aa15.15■□□□□ 0.02
SMPD1-210ENST00000534405 DIAPH2-AS1Q14236 149 aa15.15■□□□□ 0.02
SMPD1-210ENST00000534405 ADGRG4Q8IZF6 3080 aa15.15■□□□□ 0.02
SMPD1-210ENST00000534405 C17orf100A8MU93 164 aa15.15■□□□□ 0.02
SMPD1-210ENST00000534405 CD69Q07108 199 aa15.15■□□□□ 0.02
SMPD1-210ENST00000534405 PATE2Q6UY27 113 aa15.15■□□□□ 0.02
SMPD1-210ENST00000534405 U3KQK5 164 aa15.15■□□□□ 0.02
SMPD1-210ENST00000534405 LOC389332A0A1B0GUA5 103 aa15.14■□□□□ 0.01
SMPD1-210ENST00000534405 TMEM200BQ69YZ2 307 aa15.14■□□□□ 0.01
SMPD1-210ENST00000534405 ACACAQ13085 2346 aa15.14■□□□□ 0.01
SMPD1-210ENST00000534405 FAM90A27PA6NNH2 459 aa15.14■□□□□ 0.01
SMPD1-210ENST00000534405 BSPH1Q075Z2 132 aa15.14■□□□□ 0.01
SMPD1-210ENST00000534405 TMEM30BQ3MIR4 351 aa15.14■□□□□ 0.01
SMPD1-210ENST00000534405 CITED1Q99966 193 aa15.14■□□□□ 0.01
SMPD1-210ENST00000534405 RBP4P02753 201 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 NDUFA4L2Q9NRX3 87 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 ZFHX2Q9C0A1 2572 aaPredicted RBP15.13■□□□□ 0.01
SMPD1-210ENST00000534405 GAGE12JA6NER3 117 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 GAGE7O76087 117 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 GAGE12FP0CL80 117 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 GAGE12GP0CL81 117 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 GAGE12IP0CL82 117 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 TNFRSF1AP19438 455 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 GAGE4Q13068 117 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 LYPD2Q6UXB3 125 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 ZNF493Q6ZR52 646 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 OR1L8Q8NGR8 309 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 PPDPFLQ8WWR9 84 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 NAV3Q8IVL0 2385 aa15.13■□□□□ 0.01
SMPD1-210ENST00000534405 SRD5A1P18405 259 aa15.12■□□□□ 0.01
SMPD1-210ENST00000534405 EVI2AP22794 236 aa15.12■□□□□ 0.01
SMPD1-210ENST00000534405 J3KRW8 73 aa15.12■□□□□ 0.01
SMPD1-210ENST00000534405 ARL3P36405 182 aa15.12■□□□□ 0.01
SMPD1-210ENST00000534405 C10orf55Q5SWW7 151 aa15.12■□□□□ 0.01
SMPD1-210ENST00000534405 DMXL2Q8TDJ6 3036 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 CGB1A6NKQ9 187 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 D6R8Y8 96 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 FXYD7P58549 80 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 KLF17Q5JT82 389 aaPredicted RBP15.11■□□□□ 0.01
SMPD1-210ENST00000534405 CARD19Q96LW7 228 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 DCHS1Q96JQ0 3298 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 TCRAP04437 139 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 ODF1Q14990 250 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 CCL17Q92583 94 aa15.11■□□□□ 0.01
SMPD1-210ENST00000534405 PLXNB1O43157 2135 aa15.1■□□□□ 0.01
SMPD1-210ENST00000534405 TMEM178BH3BS89 294 aa15.1■□□□□ 0.01
SMPD1-210ENST00000534405 PIEZO2Q9H5I5 2752 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms