RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 BANF2Q9H503 90 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 TAF9BQ9HBM6 251 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 C12orf4Q9NQ89 552 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 OR2S2Q9NQN1 319 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 METTL1Q9UBP6 276 aaKnown RBP3.12□□□□□ -1.91
CASP4-213ENST00000534356 TRAPPC2LQ9UL33 140 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 V9GYY9 64 aa3.12□□□□□ -1.91
CASP4-213ENST00000534356 LOC102724200A0A096LPH7 203 aaPredicted RBP3.11□□□□□ -1.91
CASP4-213ENST00000534356 A0A1B0GW15 77 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 C16orf90A8MZG2 172 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 J3QRE1 110 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 GNGT2O14610 69 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 ORC5O43913 435 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 SULT1C4O75897 302 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 GCGP01275 180 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 ISG15P05161 165 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 OCM2P0CE71 109 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 OCMP0CE72 109 aaPredicted RBP3.11□□□□□ -1.91
CASP4-213ENST00000534356 IL3RAP26951 378 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 RBX1P62877 108 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 PLGLAQ15195 96 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 TNXAQ16473 311 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 TMEM244Q5VVB8 128 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 ZNF767PQ75MW2 155 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 SELENOHQ8IZQ5 122 aaKnown RBP3.11□□□□□ -1.91
CASP4-213ENST00000534356 PXT1Q8NFP0 134 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 OR1P1Q8NH06 330 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 NEK7Q8TDX7 302 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 CCDC124Q96CT7 223 aaKnown RBP3.11□□□□□ -1.91
CASP4-213ENST00000534356 CENPNQ96H22 339 aaPredicted RBP3.11□□□□□ -1.91
CASP4-213ENST00000534356 GPER1Q99527 375 aa3.11□□□□□ -1.91
CASP4-213ENST00000534356 DMBT1Q9UGM3 2413 aaPredicted RBP3.1□□□□□ -1.91
CASP4-213ENST00000534356 IGLL5B9A064 214 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 E7EUB6 86 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 H7C2Y5 167 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 MAS1P04201 325 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 HTR1AP08908 422 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 NQO2P16083 231 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 CBLN1P23435 193 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 RAB4BP61018 213 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 TMEM267Q0VDI3 215 aaPredicted RBP3.1□□□□□ -1.91
CASP4-213ENST00000534356 IL15RAQ13261 267 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 VAMP3Q15836 100 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 ATP6V1FQ16864 119 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 CCDC58Q4VC31 144 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 SAPCD1Q5SSQ6 148 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 C10orf55Q5SWW7 151 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 OR10K2Q6IF99 312 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 TMPRSS11AQ6ZMR5 421 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 IDO2Q6ZQW0 420 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 MRPL30Q8TCC3 161 aaKnown RBP3.1□□□□□ -1.91
CASP4-213ENST00000534356 FAAP24Q9BTP7 215 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 CST11Q9H112 138 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 COA4Q9NYJ1 87 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 CLEC2DQ9UHP7 191 aa3.1□□□□□ -1.91
CASP4-213ENST00000534356 ZNF230Q9UIE0 474 aaPredicted RBP3.1□□□□□ -1.91
CASP4-213ENST00000534356 SRRM2Q9UQ35 2752 aaKnown RBP3.1□□□□□ -1.91
CASP4-213ENST00000534356 TRAV8-7A0A075B6U6 113 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 LOC105371267A0A1B0GV96 52 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 A0A1B0GW64 132 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 DAPL1A0PJW8 107 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 TMEM213A2RRL7 107 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 NDUFS6O75380 124 aaKnown RBP3.09□□□□□ -1.91
CASP4-213ENST00000534356 OR2A4O95047 310 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 NTF3P20783 257 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 RHOGP84095 191 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 TAL2Q16559 108 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 GAPTQ8N292 157 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.09□□□□□ -1.91
CASP4-213ENST00000534356 ZNF680Q8NEM1 530 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 OR5D14Q8NGL3 314 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 DYNLRB2Q8TF09 96 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 AGMATQ9BSE5 352 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 MARVELD1Q9BSK0 173 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 METTL9Q9H1A3 318 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 RHOFQ9HBH0 211 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 ERGIC3Q9Y282 383 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 WASHC3Q9Y3C0 194 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 LRRC42Q9Y546 428 aa3.09□□□□□ -1.91
CASP4-213ENST00000534356 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.08□□□□□ -1.92
CASP4-213ENST00000534356 IGKV1-6A0A0C4DH72 117 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 EFCAB10A6NFE3 127 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 MCRIP1C9JLW8 97 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 DENRO43583 198 aaKnown RBP3.08□□□□□ -1.92
CASP4-213ENST00000534356 YPEL1O60688 119 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 PTTG1O95997 202 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 SCTP09683 121 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 RAB5AP20339 215 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 FUSP35637 526 aaKnown RBP eCLIP3.08□□□□□ -1.92
CASP4-213ENST00000534356 ZNF93P35789 620 aaPredicted RBP3.08□□□□□ -1.92
CASP4-213ENST00000534356 KCNJ3P48549 501 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 UBE2KP61086 200 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 IFITM3Q01628 133 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 ATP5G2Q06055 141 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 HMGN3Q15651 99 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 DNAL1Q4LDG9 190 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 KDM4DQ6B0I6 523 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 GLIPR1L1Q6UWM5 242 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 CLEC19AQ6UXS0 136 aa3.08□□□□□ -1.92
CASP4-213ENST00000534356 C6orf201Q7Z4U5 140 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms