RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 FXYD5Q96DB9 178 aa9.86□□□□□ -0.83
SCN3B-206ENST00000530277 JKAMPQ9P055 326 aa9.86□□□□□ -0.83
SCN3B-206ENST00000530277 IGLC7A0M8Q6 106 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 H3BVH4 76 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 TMEM97Q5BJF2 176 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 DMXL2Q8TDJ6 3036 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 K7ENP7 123 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 SCGB1C2P0DMR2 95 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
SCN3B-206ENST00000530277 TEX36Q5VZQ5 186 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 IGFL2Q6UWQ7 119 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 TRAV9-2A0A087WT02 112 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 K7ERU9 68 aa9.85□□□□□ -0.83
SCN3B-206ENST00000530277 IFI27P40305 119 aaPredicted RBP9.85□□□□□ -0.83
SCN3B-206ENST00000530277 NEU4Q8WWR8 484 aaPredicted RBP9.85□□□□□ -0.83
SCN3B-206ENST00000530277 GAGE10A6NGK3 116 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 NDUFA3O95167 84 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 VWC2Q2TAL6 325 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 TRAV9-1A0A075B6T8 112 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 TYMSP04818 313 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 LEPP41159 167 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 AMMECR1LQ6DCA0 310 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 Q86TA4 180 aa9.84□□□□□ -0.83
SCN3B-206ENST00000530277 OR10J3Q5JRS4 329 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 PVRIGQ6DKI7 326 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 LINC00173Q6ZV60 143 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 ATG2AQ2TAZ0 1938 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 FABP5P3A8MUU1 101 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 H3BUX3 64 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 SMAD7O15105 426 aaKnown RBP9.83□□□□□ -0.84
SCN3B-206ENST00000530277 IGLC1P0CG04 106 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 MEGF9Q9H1U4 602 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 TP73-AS1Q9UF72 201 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 DOPEY1Q5JWR5 2465 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 ATP6V0E1O15342 81 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 SH2D1AO60880 128 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 P0C879 139 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 DNLZQ5SXM8 178 aa9.83□□□□□ -0.84
SCN3B-206ENST00000530277 FAM120AOSQ5T036 256 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 ZNF256Q9Y2P7 627 aaPredicted RBP9.82□□□□□ -0.84
SCN3B-206ENST00000530277 YPEL3P61236 119 aaPredicted RBP9.82□□□□□ -0.84
SCN3B-206ENST00000530277 C12orf54Q6X4T0 127 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 PIMREGQ9BSJ6 248 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 ITGB1BP1O14713 200 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 EMP1P54849 157 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 LOC107984156A0A0G2JMH3 177 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 ARL17AQ8IVW1 177 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 ZNF503Q96F45 646 aa9.82□□□□□ -0.84
SCN3B-206ENST00000530277 EXPH5Q8NEV8 1989 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 A0A1W2PRX2 142 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 Q8NA96 180 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 PYGO2Q9BRQ0 406 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 H3BUT2 72 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 ZZEF1O43149 2961 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 TSPOP30536 169 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 DEFB1P60022 68 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 ZNF56Q15929 161 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 TNFRSF14Q92956 283 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 JMJD8Q96S16 334 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 HIST1H4GQ99525 98 aa9.81□□□□□ -0.84
SCN3B-206ENST00000530277 CCL25O15444 150 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 TOMM40O96008 361 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 PRTN3P24158 256 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 C11orf52Q96A22 123 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 FAM167A-AS1Q96KT0 104 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 VGLL1Q99990 258 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 KALRNO60229 2985 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 A6NDN8 102 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 ZNF688P0C7X2 276 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 PSG3Q16557 428 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 SYS1-DBNDD2H3BUS1 97 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 IGLL1P15814 213 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 POU2AF1Q16633 256 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 DGAT2L7PQ6IED9 249 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 FAM159AQ6UWV7 190 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 PRSS57Q6UWY2 283 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 SHANK2-AS3Q9BTD1 123 aa9.8□□□□□ -0.84
SCN3B-206ENST00000530277 TRAV26-2A0A0B4J265 109 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 IGKV1-17P01599 117 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 GTSCR1Q86UQ5 136 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 NRGNQ92686 78 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 ZNF292O60281 2723 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 TRBV19A0A075B6N1 114 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 PAX8Q06710 450 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 TMEM249Q2WGJ8 235 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 OR1N2Q8NGR9 330 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 ASPMQ8IZT6 3477 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 PRSS2P07478 247 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 PLP1P60201 277 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 IFI27L1Q96BM0 104 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 LY96Q9Y6Y9 160 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 AKAP13Q12802 2813 aa9.79□□□□□ -0.84
SCN3B-206ENST00000530277 GUSBP1Q15486 140 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 CEACAM4O75871 244 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 CGB3P0DN86 165 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 CGB7P0DN87 165 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 SMAGPQ0VAQ4 97 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 Q0VG73 95 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 ZNF562Q6V9R5 426 aa9.78□□□□□ -0.84
SCN3B-206ENST00000530277 ZNF491Q8N8L2 437 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms