RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 TEPPQ6URK8 271 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 BAP18Q8IXM2 172 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 Q8N1X5 172 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 C6orf223Q8N319 242 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 HYLS1Q96M11 299 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 WFDC1Q9HC57 220 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 DOK5Q9P104 306 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 WDR83OSQ9Y284 106 aa9.95□□□□□ -0.82
CPSF1-201ENST00000526271 ID1P41134 155 aa9.94□□□□□ -0.82
CPSF1-201ENST00000526271 ZNF345Q14585 488 aa9.94□□□□□ -0.82
CPSF1-201ENST00000526271 CLINT1Q14677 625 aa9.94□□□□□ -0.82
CPSF1-201ENST00000526271 RNF182Q8N6D2 247 aa9.94□□□□□ -0.82
CPSF1-201ENST00000526271 RNF141Q8WVD5 230 aa9.94□□□□□ -0.82
CPSF1-201ENST00000526271 ATP5SQ99766 215 aa9.94□□□□□ -0.82
CPSF1-201ENST00000526271 TRAV12-2A0A075B6T6 113 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 ZNF98A6NK75 572 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 CXCL2P19875 107 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 FAM3BP58499 235 aaPredicted RBP9.93□□□□□ -0.82
CPSF1-201ENST00000526271 SPATA31B1PQ5VZV4 182 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 CYP2G1PQ6ZSU1 146 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 OR8I2Q8N0Y5 310 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 KCNRGQ8N5I3 272 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 C15orf53Q8NAA6 179 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 PPP1R14BQ96C90 147 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 MGST2Q99735 147 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 RSG1Q9BU20 258 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 PARD6GQ9BYG4 376 aaPredicted RBP9.93□□□□□ -0.82
CPSF1-201ENST00000526271 SMIM3Q9BZL3 60 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 WDR61Q9GZS3 305 aaKnown RBP9.93□□□□□ -0.82
CPSF1-201ENST00000526271 SLC45A2Q9UMX9 530 aa9.93□□□□□ -0.82
CPSF1-201ENST00000526271 VPS13BQ7Z7G8 4022 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 A0A0D9SG52 128 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 TAAR5O14804 337 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 AGPAT2O15120 278 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 MPDU1O75352 247 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 CFDP00746 253 aaPredicted RBP9.92□□□□□ -0.82
CPSF1-201ENST00000526271 DEFB130BP0DP73 79 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 DEFB130AP0DP74 79 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 S100A7P31151 101 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 SELENOTP62341 195 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 LGALSLQ3ZCW2 172 aaPredicted RBP9.92□□□□□ -0.82
CPSF1-201ENST00000526271 EBLN2Q6P2I7 272 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 C16orf92Q96LL3 132 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 RPRMQ9NS64 109 aa9.92□□□□□ -0.82
CPSF1-201ENST00000526271 DMBT1Q9UGM3 2413 aaPredicted RBP9.92□□□□□ -0.82
CPSF1-201ENST00000526271 UBE2L5PA0A1B0GUS4 154 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 LYRM9A8MSI8 78 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 IFNA5P01569 189 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 LINC00869P0C866 280 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 FGF7P21781 194 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 TSPOP30536 169 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 RPL29P47914 159 aaKnown RBP9.91□□□□□ -0.82
CPSF1-201ENST00000526271 CAMLGP49069 296 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 RAB31Q13636 194 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 KIR3DS1Q14943 382 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 ZFP69Q49AA0 526 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 SAMD13Q5VXD3 122 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 SPATA12Q7Z6I5 190 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 SLC25A39Q9BZJ4 359 aaPredicted RBP9.91□□□□□ -0.82
CPSF1-201ENST00000526271 SLC25A22Q9H936 323 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 CYTL1Q9NRR1 136 aa9.91□□□□□ -0.82
CPSF1-201ENST00000526271 F5H768 121 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 PFDN1O60925 122 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 NUDT3O95989 172 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 PLP1P60201 277 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 ZNF266Q14584 549 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 OPCMLQ14982 345 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 TMUB2Q71RG4 321 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 BPIFCQ8NFQ6 507 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 NPCDR1Q9BY65 106 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 SCRT2Q9NQ03 307 aa9.9□□□□□ -0.82
CPSF1-201ENST00000526271 H3BRN7 92 aa9.89□□□□□ -0.83
CPSF1-201ENST00000526271 LINC00612Q8N6U2 182 aa9.89□□□□□ -0.83
CPSF1-201ENST00000526271 SCGB1C1Q8TD33 95 aa9.89□□□□□ -0.83
CPSF1-201ENST00000526271 UHRF2Q96PU4 802 aa9.89□□□□□ -0.83
CPSF1-201ENST00000526271 ARPC5LQ9BPX5 153 aa9.89□□□□□ -0.83
CPSF1-201ENST00000526271 ATG101Q9BSB4 218 aa9.89□□□□□ -0.83
CPSF1-201ENST00000526271 MRPS12O15235 138 aaKnown RBP9.88□□□□□ -0.83
CPSF1-201ENST00000526271 INSP01308 110 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 MEOX2P50222 304 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 PXDC1Q5TGL8 231 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 MIC13Q5XKP0 118 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 RPL7L1Q6DKI1 246 aaKnown RBP9.88□□□□□ -0.83
CPSF1-201ENST00000526271 C9orf62Q8N4C0 152 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 TMEM208Q9BTX3 173 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 ARL6Q9H0F7 186 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 ARV1Q9H2C2 271 aa9.88□□□□□ -0.83
CPSF1-201ENST00000526271 BORCS7-ASMTA0A0B4J1R7 106 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 C17orf112F2Z3M2 114 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 BOLA2-SMG1P6H3BVE0 249 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 BCL2L11O43521 198 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 ORM2P19652 201 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 HOXA5P20719 270 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 FUSP35637 526 aaKnown RBP eCLIP9.87□□□□□ -0.83
CPSF1-201ENST00000526271 GALR1P47211 349 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 PATE2Q6UY27 113 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 SSX7Q7RTT5 188 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 RNASE8Q8TDE3 154 aaKnown RBP9.87□□□□□ -0.83
CPSF1-201ENST00000526271 SLC39A9Q9NUM3 307 aa9.87□□□□□ -0.83
CPSF1-201ENST00000526271 TIMM9Q9Y5J7 89 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms