RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 LEMD1Q68G75 181 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 RNASEKQ6P5S7 137 aaKnown RBP6.17□□□□□ -1.42
SPIDR-223ENST00000524033 LINC00173Q6ZV60 143 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 TCF24Q7RTU0 167 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 ZNF738Q8NE65 137 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 OR4C13Q8NGP0 309 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 RNASE8Q8TDE3 154 aaKnown RBP6.17□□□□□ -1.42
SPIDR-223ENST00000524033 TMEM186Q96B77 213 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 FLYWCH2Q96CP2 140 aaKnown RBP6.17□□□□□ -1.42
SPIDR-223ENST00000524033 BPESC1Q9GZL8 116 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 DYNLRB1Q9NP97 96 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 TMEM14CQ9P0S9 112 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 PLA2G2DQ9UNK4 145 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 WASHC3Q9Y3C0 194 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 CADP27708 2225 aa6.17□□□□□ -1.42
SPIDR-223ENST00000524033 SONP18583 2426 aaKnown RBP6.16□□□□□ -1.42
SPIDR-223ENST00000524033 TRAV30A0A087WSZ9 112 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 LOC102724200A0A096LPH7 203 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-223ENST00000524033 PGPA6NDG6 321 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 OR4C46A6NHA9 309 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 ZNF785A8K8V0 405 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 SYS1-DBNDD2H3BUS1 97 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 TAX1BP3O14907 124 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 IGLV2-11P01706 119 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 TCRAP04437 139 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 OR5AL1P0C617 328 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 CCL3L1P16619 93 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 PTTG1IPP53801 180 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 FOXA3P55318 350 aaPredicted RBP6.16□□□□□ -1.42
SPIDR-223ENST00000524033 VMA21Q3ZAQ7 101 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 TMEM200BQ69YZ2 307 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 ETFRF1Q6IPR1 90 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 PET117Q6UWS5 81 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 RBPMS2Q6ZRY4 209 aaKnown RBP6.16□□□□□ -1.42
SPIDR-223ENST00000524033 IL17RELQ6ZVW7 336 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 LINC00305Q7Z4B0 112 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 TEX45Q8NA69 505 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 TMEM116Q8NCL8 245 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 DEFB108BQ8NET1 73 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 NDFIP1Q9BT67 221 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 MS4A6AQ9H2W1 248 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 Q9H3A6 140 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 SCRT2Q9NQ03 307 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 OTORQ9NRC9 128 aa6.16□□□□□ -1.42
SPIDR-223ENST00000524033 LYNX1G3V0Z9 82 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 NBEAP1P0C6P0 100 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 LYNX1P0DP58 116 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 CDKN1BP46527 198 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 DIAPH2-AS1Q14236 149 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 TMEM155Q4W5P6 130 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 FBLN7Q53RD9 439 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 BVES-AS1Q5T3Y7 98 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 LINC01545Q5VT33 79 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 PRR27Q6MZM9 219 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 Q6ZVH6 145 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 LINC01356Q8N9X3 169 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 H1FXQ92522 213 aaKnown RBP6.15□□□□□ -1.42
SPIDR-223ENST00000524033 TMEM191AQ9H0A3 160 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 CTSZQ9UBR2 303 aa6.15□□□□□ -1.42
SPIDR-223ENST00000524033 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.15□□□□□ -1.42
SPIDR-223ENST00000524033 C17orf100A8MU93 164 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 TEX22C9J3V5 150 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 TMEM178BH3BS89 294 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 M0QZ24 198 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 P01737 135 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 PPBPP02775 128 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 LIPFP07098 398 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 MC5RP33032 325 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 RPL27AP46776 148 aaKnown RBP6.14□□□□□ -1.43
SPIDR-223ENST00000524033 LGALS7P47929 136 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 CAMPP49913 170 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 DEFB125Q8N687 156 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 C8orf46Q8TAG6 207 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 PGLYRP4Q96LB8 373 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 KAAG1Q9UBP8 84 aa6.14□□□□□ -1.43
SPIDR-223ENST00000524033 TENM1Q9UKZ4 2725 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 hDV102S1A0JD36 115 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 B4DSR2 109 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 H3BRN7 92 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 MRPS12O15235 138 aaKnown RBP6.13□□□□□ -1.43
SPIDR-223ENST00000524033 SLC25A17O43808 307 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 IGLC1P0CG04 106 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 TNFRSF1AP19438 455 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 SRSF2Q01130 221 aaKnown RBP6.13□□□□□ -1.43
SPIDR-223ENST00000524033 KRTAP24-1Q3LI83 254 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 SLC25A34Q6PIV7 304 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 LYPD2Q6UXB3 125 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 C2orf91Q6ZV80 131 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 TMEM75Q8N9X5 138 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 OR1B1Q8NGR6 318 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 C22orf15Q8WYQ4 148 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 DPF1Q92782 380 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 RITA1Q96K30 269 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 PMCHL2Q9BQD1 86 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 ZMAT4Q9H898 229 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 TP73-AS1Q9UF72 201 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 F11RQ9Y624 299 aaKnown RBP6.13□□□□□ -1.43
SPIDR-223ENST00000524033 ARFGEF3Q5TH69 2177 aa6.13□□□□□ -1.43
SPIDR-223ENST00000524033 PPIAL4EA0A075B759 164 aa6.12□□□□□ -1.43
SPIDR-223ENST00000524033 A0A1B0GW15 77 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms