RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 NHLRC2Q8NBF2 726 aa7.41□□□□□ -1.22
SPARC-205ENST00000522348 MRPL53Q96EL3 112 aaKnown RBP7.41□□□□□ -1.22
SPARC-205ENST00000522348 SGK494Q96LW2 274 aa7.41□□□□□ -1.22
SPARC-205ENST00000522348 JMJD8Q96S16 334 aa7.41□□□□□ -1.22
SPARC-205ENST00000522348 RHPN1-AS1Q9BWJ2 59 aa7.41□□□□□ -1.22
SPARC-205ENST00000522348 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
SPARC-205ENST00000522348 IGHV3-49A0A0A0MS15 119 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 M0R3E3 92 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 CHEK1O14757 476 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 TM4SF20Q53R12 229 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 REC114Q7Z4M0 266 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 Q86TA4 180 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 C16orf95Q9H693 158 aa7.4□□□□□ -1.22
SPARC-205ENST00000522348 TEX15Q9BXT5 2789 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 CSPG4Q6UVK1 2322 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 TRAV8-1A0A0A6YYK1 113 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 LOC105371267A0A1B0GV96 52 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 SMIM27A0A1W2PRY6 76 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 P01737 135 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 HILS1P60008 231 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 COX19Q49B96 90 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 CT83Q5H943 113 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 SAMD13Q5VXD3 122 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 PRR27Q6MZM9 219 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 C8orf86Q6ZUL3 223 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 COX8CQ7Z4L0 72 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 OR4B1Q8NGF8 309 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 ESM1Q9NQ30 184 aa7.39□□□□□ -1.23
SPARC-205ENST00000522348 TRAV8-2A0A0B4J237 113 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 C19orf71A6NCJ1 209 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 FAM231BA6NCW3 169 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 ZNF705FA8MVS1 300 aaPredicted RBP7.38□□□□□ -1.23
SPARC-205ENST00000522348 A8MWL6 223 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 TRGC2P03986 189 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 S100A6P06703 90 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 CT45A10P0DMU9 189 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 ID1P41134 155 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 RPL11P62913 178 aaKnown RBP7.38□□□□□ -1.23
SPARC-205ENST00000522348 KLF5Q13887 457 aaPredicted RBP7.38□□□□□ -1.23
SPARC-205ENST00000522348 GBGT1Q8N5D6 347 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 TSKUQ8WUA8 353 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 C4orf3Q8WVX3 66 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 DPF1Q92782 380 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 PRR25Q96S07 402 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 NDFIP1Q9BT67 221 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 PPP1R14DQ9NXH3 145 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 CSMD1Q96PZ7 3565 aa7.38□□□□□ -1.23
SPARC-205ENST00000522348 ITPR3Q14573 2671 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 CREBBPQ92793 2442 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 IGHV4OR15-8A0A075B7B6 117 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 A0A087WW49 117 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 IZUMO1RA6ND01 250 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 A8MWP6 167 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 LINC01619G3V211 115 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 OVOL1O14753 267 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 IGFL4Q6B9Z1 124 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 ZFP82Q8N141 532 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 OR1N2Q8NGR9 330 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 GFRA4Q9GZZ7 299 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 RPP21Q9H633 154 aaKnown RBP7.37□□□□□ -1.23
SPARC-205ENST00000522348 NRN1Q9NPD7 142 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 NAT8BQ9UHF3 227 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
SPARC-205ENST00000522348 IGKV2-40A0A087WW87 121 aaPredicted RBP7.36□□□□□ -1.23
SPARC-205ENST00000522348 NPIPB6E9PJ23 425 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 M0QZ24 198 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 NDUFA7O95182 113 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 IGKV2D-40P01614 121 aaPredicted RBP7.36□□□□□ -1.23
SPARC-205ENST00000522348 HLA-DMBP28068 263 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 HOXD3P31249 432 aaPredicted RBP7.36□□□□□ -1.23
SPARC-205ENST00000522348 TMEM78Q5T7P6 136 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 WDR73Q6P4I2 378 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 RASL11AQ6T310 242 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 LINC00322Q6ZN03 302 aaPredicted RBP7.36□□□□□ -1.23
SPARC-205ENST00000522348 C9orf47Q6ZRZ4 202 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 TCF24Q7RTU0 167 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 RNF182Q8N6D2 247 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 WIPF2Q8TF74 440 aaPredicted RBP7.36□□□□□ -1.23
SPARC-205ENST00000522348 ZC2HC1AQ96GY0 325 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 LINC00477Q96M19 166 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 VGLL1Q99990 258 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 GNB1LQ9BYB4 327 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 SAV1Q9H4B6 383 aaPredicted RBP7.36□□□□□ -1.23
SPARC-205ENST00000522348 TRAPPC1Q9Y5R8 145 aa7.36□□□□□ -1.23
SPARC-205ENST00000522348 TMEM213A2RRL7 107 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 INAFM1C9JVW0 142 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 PRAC2D3DTV9 90 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 SOCS3O14543 225 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 CBLN1P23435 193 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 ZNF138P52744 262 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 FOXA3P55318 350 aaPredicted RBP7.35□□□□□ -1.23
SPARC-205ENST00000522348 SYNJ2BPP57105 145 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 SMUG1Q53HV7 270 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 TCTEX1D4Q5JR98 221 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 ACTL10Q5JWF8 245 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 FAM162BQ5T6X4 162 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 OR11H1Q8NG94 326 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 LINC01006Q8NI28 216 aa7.35□□□□□ -1.23
SPARC-205ENST00000522348 FRZBQ92765 325 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms