RNA–Protein interactions for RNA: ENST00000520539.5

UBR5-207, Transcript of ubiquitin protein ligase E3 component n-recognin 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBR5, Length 10,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR5-207ENST00000520539 IGHV5-10-1A0A0J9YXX1 117 aa12.76□□□□□ -0.37
UBR5-207ENST00000520539 C9JQL5 133 aa12.76□□□□□ -0.37
UBR5-207ENST00000520539 Q71RC1 249 aaPredicted RBP12.76□□□□□ -0.37
UBR5-207ENST00000520539 CFHR4Q92496 578 aa12.76□□□□□ -0.37
UBR5-207ENST00000520539 TMEM133Q9H2Q1 129 aa12.76□□□□□ -0.37
UBR5-207ENST00000520539 CELA3AP09093 270 aa12.76□□□□□ -0.37
UBR5-207ENST00000520539 JMJD7-PLA2G4BH0Y9G9 81 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 DAD1P61803 113 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 WDR83OSQ9Y284 106 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 Q86TA4 180 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 C18orf32Q8TCD1 76 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 KIR2DL5BA0A0G2JN68 375 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 KIR2DL5BA0A0G2JPC4 375 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 OOSP1A8MZH6 123 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 C15orf32Q32M92 178 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 KIR2DL5AQ8N109 375 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 PRSS22Q9GZN4 317 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 C14orf178Q8N769 122 aaPredicted RBP12.75□□□□□ -0.37
UBR5-207ENST00000520539 SHANK3Q9BYB0 1731 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 NLRC5Q86WI3 1866 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 TMEM240Q5SV17 173 aa12.75□□□□□ -0.37
UBR5-207ENST00000520539 IGHV1-45A0A0A0MS14 117 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 HERV-K104P63124 156 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 C2CD4DB7Z1M9 353 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 RNASE2P10153 161 aaKnown RBP12.74□□□□□ -0.37
UBR5-207ENST00000520539 ZNF493Q6ZR52 646 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 COL24A1Q17RW2 1714 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 PPP1R32Q7Z5V6 425 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 SLC25A28Q96A46 364 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 UQCRQO14949 82 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 PFN1P07737 140 aaKnown RBP12.74□□□□□ -0.37
UBR5-207ENST00000520539 TM4SF4P48230 202 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 FOXC1Q12948 553 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 FAM168AQ92567 244 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 REG4Q9BYZ8 158 aa12.74□□□□□ -0.37
UBR5-207ENST00000520539 LINC00527Q9UJ94 153 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 TANC1Q9C0D5 1861 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 SMIM2Q9BVW6 85 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 BAALC-AS2P0C853 105 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 IGHV3-35A0A0C4DH35 117 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 J3QQQ9 107 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 CTSBP07858 339 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
UBR5-207ENST00000520539 PIN1P1O15428 100 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 ZNF71Q9NQZ8 489 aaPredicted RBP12.73□□□□□ -0.37
UBR5-207ENST00000520539 DEPPQ9NTK1 212 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 HCSTQ9UBK5 93 aa12.73□□□□□ -0.37
UBR5-207ENST00000520539 BTCP35070 178 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 SPSB2Q99619 263 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 C2orf66Q6UXQ4 117 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 WFDC11Q8NEX6 87 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 PMS2P5A8MQ11 134 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 NDUFB8O95169 186 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 LCNL1Q6ZST4 164 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 NRTNQ99748 197 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 DEFB125Q8N687 156 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 A0A0G2JK05 382 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 HRKO00198 91 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 CCL3L1P16619 93 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 MORN2Q502X0 79 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 RHOHQ15669 191 aa12.72□□□□□ -0.37
UBR5-207ENST00000520539 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
UBR5-207ENST00000520539 TRAV3A0A0B4J244 114 aa12.71□□□□□ -0.37
UBR5-207ENST00000520539 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
UBR5-207ENST00000520539 FOXI2Q6ZQN5 318 aa12.71□□□□□ -0.37
UBR5-207ENST00000520539 IGKV1D-16P01601 117 aa12.71□□□□□ -0.37
UBR5-207ENST00000520539 SIGLEC12Q96PQ1 595 aa12.71□□□□□ -0.37
UBR5-207ENST00000520539 REPIN1Q9BWE0 567 aaKnown RBP12.71□□□□□ -0.37
UBR5-207ENST00000520539 NTN3O00634 580 aaPredicted RBP12.71□□□□□ -0.38
UBR5-207ENST00000520539 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.38
UBR5-207ENST00000520539 C16orf47Q6ZP98 133 aaPredicted RBP12.71□□□□□ -0.38
UBR5-207ENST00000520539 PEBP1P30086 187 aaKnown RBP12.7□□□□□ -0.38
UBR5-207ENST00000520539 IGHV3-23P01764 117 aa12.7□□□□□ -0.38
UBR5-207ENST00000520539 TEX48A0A1B0GUV7 120 aa12.7□□□□□ -0.38
UBR5-207ENST00000520539 NMSQ5H8A3 153 aa12.7□□□□□ -0.38
UBR5-207ENST00000520539 ZNF106Q9H2Y7 1883 aaKnown RBP12.7□□□□□ -0.38
UBR5-207ENST00000520539 NDUFV3P56181 108 aaKnown RBP12.7□□□□□ -0.38
UBR5-207ENST00000520539 ZNF329Q86UD4 541 aa12.7□□□□□ -0.38
UBR5-207ENST00000520539 TMEM14EPQ6UXP3 125 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 EXOC3-AS1Q8N2X6 119 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 PTPRBP23467 1997 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 SMIM27A0A1W2PRY6 76 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 CXCL10P02778 98 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 SPINK2P20155 84 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 LINC01590Q5TEZ4 76 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 PYGO2Q9BRQ0 406 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 THSD7AQ9UPZ6 1657 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 FAM231DQ6ZW35 169 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 CFC1BP0CG36 223 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 CFC1P0CG37 223 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 KIAA1549LQ6ZVL6 1849 aa12.69□□□□□ -0.38
UBR5-207ENST00000520539 NREPQ16612 68 aa12.68□□□□□ -0.38
UBR5-207ENST00000520539 RETNQ9HD89 108 aa12.68□□□□□ -0.38
UBR5-207ENST00000520539 C22orf46C9J442 243 aa12.68□□□□□ -0.38
UBR5-207ENST00000520539 TIAF1O95411 115 aa12.68□□□□□ -0.38
UBR5-207ENST00000520539 FAM60AQ9NP50 221 aa12.68□□□□□ -0.38
UBR5-207ENST00000520539 DAZ1Q9NQZ3 744 aaKnown RBP12.68□□□□□ -0.38
UBR5-207ENST00000520539 TLN2Q9Y4G6 2542 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms