RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 FER1L5A0AVI2 2057 aa12.95□□□□□ -0.34
TRIM41-207ENST00000515223 A8MWP6 167 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 NDUFB8O95169 186 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 CFHR2P36980 270 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 PDE6HQ13956 83 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 RMI2Q96E14 147 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 RNASE2P10153 161 aaKnown RBP12.94□□□□□ -0.34
TRIM41-207ENST00000515223 IGFL4Q6B9Z1 124 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 FOXL2NBQ6ZUU3 175 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
TRIM41-207ENST00000515223 MYMXA0A1B0GTQ4 84 aa12.93□□□□□ -0.34
TRIM41-207ENST00000515223 Q8TCH9 128 aa12.93□□□□□ -0.34
TRIM41-207ENST00000515223 CGB3P0DN86 165 aa12.93□□□□□ -0.34
TRIM41-207ENST00000515223 LY6G5BQ8NDX9 201 aa12.93□□□□□ -0.34
TRIM41-207ENST00000515223 SHANK2-AS3Q9BTD1 123 aa12.93□□□□□ -0.34
TRIM41-207ENST00000515223 FNDC4Q9H6D8 234 aaPredicted RBP12.93□□□□□ -0.34
TRIM41-207ENST00000515223 FNDC10F2Z333 226 aa12.93□□□□□ -0.34
TRIM41-207ENST00000515223 POLR3KQ9Y2Y1 108 aaPredicted RBP12.93□□□□□ -0.34
TRIM41-207ENST00000515223 A0A087WWL8 130 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 IGKV1-6A0A0C4DH72 117 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 PRIMA1Q86XR5 153 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 CYYR1Q96J86 154 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 RPRMLQ8N4K4 120 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 IGKV1-16P04430 117 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 FANCMQ8IYD8 2048 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 PLXNB3Q9ULL4 1909 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 NTF4P34130 210 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 SSBP2P81877 361 aaPredicted RBP12.92□□□□□ -0.34
TRIM41-207ENST00000515223 Q6ZS49 121 aa12.92□□□□□ -0.34
TRIM41-207ENST00000515223 TRPT1Q86TN4 253 aaKnown RBP12.92□□□□□ -0.34
TRIM41-207ENST00000515223 LEPROTO15243 131 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 NPC2P61916 151 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 ZNF726P1Q15940 193 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 CGB7P0DN87 165 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 TCTEX1D4Q5JR98 221 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 C1orf122Q6ZSJ8 110 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 DEFB104AQ8WTQ1 72 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 ORAOV1Q8WV07 137 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 PCNX1Q96RV3 2341 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 A8MWV9 139 aa12.91□□□□□ -0.34
TRIM41-207ENST00000515223 TANC1Q9C0D5 1861 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 A0A1W2PPI3 338 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 PAX9P55771 341 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 OVOL2Q9BRP0 275 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 TRBV25-1A0A075B6N4 114 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 LGALS1P09382 135 aaKnown RBP12.9□□□□□ -0.34
TRIM41-207ENST00000515223 YPEL3P61236 119 aaPredicted RBP12.9□□□□□ -0.34
TRIM41-207ENST00000515223 GAGE12JA6NER3 117 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 GAGE1Q13065 139 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 GAGE4Q13068 117 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 GAGE5Q13069 117 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 SPINK13Q1W4C9 94 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 GAGE13Q4V321 117 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 SPOCK3Q9BQ16 436 aa12.9□□□□□ -0.34
TRIM41-207ENST00000515223 IL17RELQ6ZVW7 336 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 SPAG8Q99932 426 aaPredicted RBP12.89□□□□□ -0.35
TRIM41-207ENST00000515223 SNHG12Q9BXW3 62 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 HSD52Q0P140 79 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 LY96Q9Y6Y9 160 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 TRAV8-1A0A0A6YYK1 113 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 DLX4Q92988 240 aaPredicted RBP12.89□□□□□ -0.35
TRIM41-207ENST00000515223 ZNF479Q96JC4 524 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 DKK1O94907 266 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 C15orf62A8K5M9 175 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 ELANEP08246 267 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
TRIM41-207ENST00000515223 RPL32P62910 135 aaKnown RBP12.89□□□□□ -0.35
TRIM41-207ENST00000515223 G3V318 75 aa12.88□□□□□ -0.35
TRIM41-207ENST00000515223 PFN1P07737 140 aaKnown RBP12.88□□□□□ -0.35
TRIM41-207ENST00000515223 TIMM21Q9BVV7 248 aa12.88□□□□□ -0.35
TRIM41-207ENST00000515223 CFHR3Q02985 330 aa12.88□□□□□ -0.35
TRIM41-207ENST00000515223 PRSS33Q8NF86 280 aa12.88□□□□□ -0.35
TRIM41-207ENST00000515223 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
TRIM41-207ENST00000515223 DOCK9Q9BZ29 2069 aa12.88□□□□□ -0.35
TRIM41-207ENST00000515223 KNCNA6PVL3 124 aa12.88□□□□□ -0.35
TRIM41-207ENST00000515223 DMRTC2Q8IXT2 367 aaPredicted RBP12.88□□□□□ -0.35
TRIM41-207ENST00000515223 TRAV8-4A0A0B4J246 113 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 DNAJC30Q96LL9 226 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 NAA38Q9BRA0 125 aaKnown RBP12.87□□□□□ -0.35
TRIM41-207ENST00000515223 KLF12Q9Y4X4 402 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 LRRK1Q38SD2 2015 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 FRMPD3Q5JV73 1810 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 NDUFA4O00483 81 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 AZU1P20160 251 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 hDV102S1A0JD36 115 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 NCOR1P1Q9H4R4 102 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 KLF2Q9Y5W3 355 aaPredicted RBP12.87□□□□□ -0.35
TRIM41-207ENST00000515223 NKAPP1Q8N9T2 125 aa12.87□□□□□ -0.35
TRIM41-207ENST00000515223 GAGE12BA1L429 117 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 GAGE7O76087 117 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 GAGE12FP0CL80 117 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 GAGE12GP0CL81 117 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 GAGE12IP0CL82 117 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 MRPL27Q9P0M9 148 aaKnown RBP12.86□□□□□ -0.35
TRIM41-207ENST00000515223 KIAA2026Q5HYC2 2103 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 KIAA1671Q9BY89 1806 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 A0A1B0GV72 72 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 TMEM158Q8WZ71 300 aa12.86□□□□□ -0.35
TRIM41-207ENST00000515223 TMEM126AQ9H061 195 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms