RNA–Protein interactions for RNA: ENST00000514572.1

RFC1-216, Transcript of replication factor C subunit 1, humanhuman

TSL 2

Gene RFC1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-216ENST00000514572 C11orf40Q8WZ69 217 aa2.55□□□□□ -2
RFC1-216ENST00000514572 SDF2Q99470 211 aa2.55□□□□□ -2
RFC1-216ENST00000514572 LINC00470Q9BZP3 86 aa2.55□□□□□ -2
RFC1-216ENST00000514572 TANC2Q9HCD6 1990 aa2.55□□□□□ -2
RFC1-216ENST00000514572 DSPPQ9NZW4 1301 aa2.55□□□□□ -2
RFC1-216ENST00000514572 TIMM22Q9Y584 194 aa2.55□□□□□ -2
RFC1-216ENST00000514572 SORL1Q92673 2214 aa2.54□□□□□ -2
RFC1-216ENST00000514572 A0A087WUJ7 227 aa2.54□□□□□ -2
RFC1-216ENST00000514572 CLPSL1A2RUU4 121 aa2.54□□□□□ -2
RFC1-216ENST00000514572 GRIFINA4D1Z8 144 aa2.54□□□□□ -2
RFC1-216ENST00000514572 A8MUN3 132 aa2.54□□□□□ -2
RFC1-216ENST00000514572 OR11H12B2RN74 326 aa2.54□□□□□ -2
RFC1-216ENST00000514572 FAAHO00519 579 aa2.54□□□□□ -2
RFC1-216ENST00000514572 OR2T1O43869 369 aa2.54□□□□□ -2
RFC1-216ENST00000514572 CD79AP11912 226 aa2.54□□□□□ -2
RFC1-216ENST00000514572 MAGEA12P43365 314 aa2.54□□□□□ -2
RFC1-216ENST00000514572 PSG4Q00888 419 aa2.54□□□□□ -2
RFC1-216ENST00000514572 ARHGAP11BQ3KRB8 267 aa2.54□□□□□ -2
RFC1-216ENST00000514572 AKIRIN2Q53H80 203 aa2.54□□□□□ -2
RFC1-216ENST00000514572 MSRB3Q8IXL7 192 aa2.54□□□□□ -2
RFC1-216ENST00000514572 SLC35F6Q8N357 371 aa2.54□□□□□ -2
RFC1-216ENST00000514572 SLC22A24Q8N4F4 322 aa2.54□□□□□ -2
RFC1-216ENST00000514572 PACRGLQ8N7B6 248 aa2.54□□□□□ -2
RFC1-216ENST00000514572 OR11H2Q8NH07 326 aa2.54□□□□□ -2
RFC1-216ENST00000514572 OR52E6Q96RD3 313 aa2.54□□□□□ -2
RFC1-216ENST00000514572 MND1Q9BWT6 205 aa2.54□□□□□ -2
RFC1-216ENST00000514572 DPY30Q9C005 99 aa2.54□□□□□ -2
RFC1-216ENST00000514572 CACYBPQ9HB71 228 aaKnown RBP2.54□□□□□ -2
RFC1-216ENST00000514572 GPR84Q9NQS5 396 aa2.54□□□□□ -2
RFC1-216ENST00000514572 IL20Q9NYY1 176 aa2.54□□□□□ -2
RFC1-216ENST00000514572 MRPL27Q9P0M9 148 aaKnown RBP2.54□□□□□ -2
RFC1-216ENST00000514572 AK3Q9UIJ7 227 aa2.54□□□□□ -2
RFC1-216ENST00000514572 A0A1B0GW54 56 aa2.53□□□□□ -2
RFC1-216ENST00000514572 UBL3O95164 117 aa2.53□□□□□ -2
RFC1-216ENST00000514572 HAND1O96004 215 aa2.53□□□□□ -2
RFC1-216ENST00000514572 IGHV1-69P01742 117 aa2.53□□□□□ -2
RFC1-216ENST00000514572 TFPTP0C1Z6 253 aa2.53□□□□□ -2
RFC1-216ENST00000514572 LGALS3P17931 250 aaKnown RBP2.53□□□□□ -2
RFC1-216ENST00000514572 HSD11B1P28845 292 aa2.53□□□□□ -2
RFC1-216ENST00000514572 RPL38P63173 70 aaKnown RBP2.53□□□□□ -2
RFC1-216ENST00000514572 C1orf140Q5VVS0 124 aa2.53□□□□□ -2
RFC1-216ENST00000514572 DEFB108BQ8NET1 73 aa2.53□□□□□ -2
RFC1-216ENST00000514572 SLC30A7Q8NEW0 376 aa2.53□□□□□ -2
RFC1-216ENST00000514572 OR5D16Q8NGK9 328 aa2.53□□□□□ -2
RFC1-216ENST00000514572 RPS4Y2Q8TD47 263 aa2.53□□□□□ -2
RFC1-216ENST00000514572 PPP3R2Q96LZ3 170 aa2.53□□□□□ -2
RFC1-216ENST00000514572 PAIP2Q9BPZ3 127 aaKnown RBP2.53□□□□□ -2
RFC1-216ENST00000514572 TMEM222Q9H0R3 208 aa2.53□□□□□ -2
RFC1-216ENST00000514572 TLNRD1Q9H1K6 362 aa2.53□□□□□ -2
RFC1-216ENST00000514572 MRPL16Q9NX20 251 aaKnown RBP2.53□□□□□ -2
RFC1-216ENST00000514572 CSMD3Q7Z407 3707 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 IGLV3-9A0A075B6K5 115 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 A0A1B0GV50 99 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 EXOC1LA0A1B0GW35 172 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 G3V3Q6 166 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 BHLHE40O14503 412 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 DBIP07108 87 aaKnown RBP2.52□□□□□ -2.01
RFC1-216ENST00000514572 LINC00032P0C843 101 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 GZMBP10144 247 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 DNAJB13P59910 316 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 GNG11P61952 73 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 HBA1P69905 142 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 FABP9Q0Z7S8 132 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 CCDC153Q494R4 210 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 TMEM155Q4W5P6 130 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 LIN52Q52LA3 116 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 C2orf91Q6ZV80 131 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 TCF24Q7RTU0 167 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 OR4S1Q8NGB4 309 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 SMCR5Q8TEV8 140 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 ROPN1LQ96C74 230 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 ZNF471Q9BX82 626 aaPredicted RBP2.52□□□□□ -2.01
RFC1-216ENST00000514572 CALML5Q9NZT1 146 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 ANGPT4Q9Y264 503 aa2.52□□□□□ -2.01
RFC1-216ENST00000514572 MDFIC2A0A1B0GVS7 189 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 TRAPPC2LH3BP13 241 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 H3BPC8 53 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 PLA2G10O15496 165 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 TTRP02766 147 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 GABRA2P47869 451 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 EDDM3AQ14507 147 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 DEFB112Q30KQ8 113 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 HCP5Q6MZN7 132 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 CCDC121Q6ZUS5 278 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 LRRC28Q86X40 367 aaPredicted RBP2.51□□□□□ -2.01
RFC1-216ENST00000514572 C20orf196Q8IYI0 205 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 C12orf43Q96C57 262 aaKnown RBP2.51□□□□□ -2.01
RFC1-216ENST00000514572 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 CENPHQ9H3R5 247 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 TMEM106BQ9NUM4 274 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 TXNL4BQ9NX01 149 aaKnown RBP2.51□□□□□ -2.01
RFC1-216ENST00000514572 CMTM6Q9NX76 183 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 PRELID1Q9Y255 219 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 DNAJC15Q9Y5T4 150 aa2.51□□□□□ -2.01
RFC1-216ENST00000514572 DNAH3Q8TD57 4116 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 TRAV36DV7A0A075B6V5 113 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 PQLC2LA1A4F0 135 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 ODF3BA8MYP8 253 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 HMGN4O00479 90 aa2.5□□□□□ -2.01
RFC1-216ENST00000514572 CTSGP08311 255 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms