RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ATP5SQ99766 215 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 PARD6GQ9BYG4 376 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 SLC35B3Q9H1N7 401 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF586Q9NXT0 402 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 CELA1Q9UNI1 258 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 TP53TG1Q9Y2A0 90 aa5.21□□□□□ -1.58
TOPBP1-207ENST00000509162 PGPEP1LA6NFU8 196 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF705EA8MWA4 302 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 ISLRO14498 428 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 CRXO43186 299 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 SPRY2O43597 315 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 COX7A2P2O60397 106 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 CFDP00746 253 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 IGKV3-20P01619 116 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 FABP1P07148 127 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 PVALBP20472 110 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 RPL12P30050 165 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 NUP62P37198 522 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 APOC4P55056 127 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 CASC10Q5T4H9 136 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 FOXI2Q6ZQN5 318 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 SSX7Q7RTT5 188 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 C1orf158Q8N1D5 194 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 OR11H4Q8NGC9 324 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 PPP1R14BQ96C90 147 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 NARS2Q96I59 477 aaKnown RBP5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 LINC00052Q96N35 136 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 AQP10Q96PS8 301 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 CSTL1Q9H114 145 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 MED28Q9H204 178 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 SH3BGRL3Q9H299 93 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 DNAH5Q8TE73 4624 aa5.2□□□□□ -1.58
TOPBP1-207ENST00000509162 IGHV4-28A0A0C4DH34 117 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF705FA8MVS1 300 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 M0R3E3 92 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 PRM2P04554 102 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 GALR1P47211 349 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 CNN1P51911 297 aaKnown RBP5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 RAB2AP61019 212 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 PAFAH1B2P68402 229 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 HBG1P69891 147 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 HBG2P69892 147 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 FAM78BQ5VT40 261 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 C10orf113Q5VZT2 155 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 DGAT2L7PQ6IED9 249 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 STHQ8IWL8 128 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 FXYD5Q96DB9 178 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 PHYHIPLQ96FC7 376 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF331Q9NQX6 463 aaPredicted RBP5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 CYTL1Q9NRR1 136 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 TNFSF18Q9UNG2 199 aa5.19□□□□□ -1.58
TOPBP1-207ENST00000509162 M0R2Z0 102 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 UBE2CO00762 179 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 SPP1P10451 314 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 RPL7P18124 248 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 CYCSP99999 105 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 ATP6V1FQ16864 119 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 PRR9Q5T870 116 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 PXDC1Q5TGL8 231 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF705AQ6ZN79 300 aaPredicted RBP5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 BAP18Q8IXM2 172 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 IL17DQ8TAD2 202 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 SLC25A31Q9H0C2 315 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 C11orf68Q9H3H3 251 aaKnown RBP5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 XCL2Q9UBD3 114 aa5.18□□□□□ -1.58
TOPBP1-207ENST00000509162 HERC2O95714 4834 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 PKHD1P08F94 4074 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 TRBV19A0A075B6N1 114 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 FXYD6-FXYD2A0A087WZ82 144 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 PLAC8L1A1L4L8 177 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 MPDU1O75352 247 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 CXCL2P19875 107 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 MEOX2P50222 304 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 AP2S1P53680 142 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 SNRPD3P62318 126 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 CD300CQ08708 224 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 FGL1Q08830 312 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 ZNF726P1Q15940 193 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 RPL7L1Q6DKI1 246 aaKnown RBP5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 MORN3Q6PF18 240 aaPredicted RBP5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 Q6ZQT7 251 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 OR8A1Q8NGG7 326 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 OR2T35Q8NGX2 323 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 OR11H2Q8NH07 326 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 GPR82Q96P67 336 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 MFFQ9GZY8 342 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 HRH4Q9H3N8 390 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 DNAJC4Q9NNZ3 241 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 TMEM14CQ9P0S9 112 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 FUT9Q9Y231 359 aa5.17□□□□□ -1.58
TOPBP1-207ENST00000509162 TRAV12-2A0A075B6T6 113 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 IGKV2-40A0A087WW87 121 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 DIRC3C9JPN6 131 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 C3orf84H3BNL1 204 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 IGKV2D-40P01614 121 aaPredicted RBP5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 RLN2P04090 185 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 PET100P0DJ07 73 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 ATP6V0CP27449 155 aa5.16□□□□□ -1.58
TOPBP1-207ENST00000509162 CMC4P56277 68 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms