RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 CNN1P51911 297 aaKnown RBP18.22■□□□□ 0.51
PVT1-201ENST00000504719 TCTAP57738 103 aa18.22■□□□□ 0.51
PVT1-201ENST00000504719 HSD17B11Q8NBQ5 300 aa18.22■□□□□ 0.51
PVT1-201ENST00000504719 RPUSD4Q96CM3 377 aaKnown RBP18.22■□□□□ 0.51
PVT1-201ENST00000504719 TIMM9Q9Y5J7 89 aa18.22■□□□□ 0.51
PVT1-201ENST00000504719 TRAV10A0A0B4J240 114 aa18.21■□□□□ 0.51
PVT1-201ENST00000504719 IGHV3OR16-12A0A075B7B8 117 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 IGLL5B9A064 214 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 RHOBP62745 196 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 HIST1H1AQ02539 215 aaPredicted RBP18.2■□□□□ 0.5
PVT1-201ENST00000504719 C12orf74Q32Q52 190 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 AMTNQ6UX39 209 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 OR8A1Q8NGG7 326 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 BLNKQ8WV28 456 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 OR51M1Q9H341 326 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 APLNQ9ULZ1 77 aa18.2■□□□□ 0.5
PVT1-201ENST00000504719 ARPC5O15511 151 aa18.19■□□□□ 0.5
PVT1-201ENST00000504719 ZNF253O75346 499 aa18.19■□□□□ 0.5
PVT1-201ENST00000504719 ACOT6Q3I5F7 207 aaPredicted RBP18.19■□□□□ 0.5
PVT1-201ENST00000504719 C1orf158Q8N1D5 194 aa18.19■□□□□ 0.5
PVT1-201ENST00000504719 PAXXQ9BUH6 204 aa18.19■□□□□ 0.5
PVT1-201ENST00000504719 GOLT1BQ9Y3E0 138 aa18.19■□□□□ 0.5
PVT1-201ENST00000504719 NDUFB4O95168 129 aa18.18■□□□□ 0.5
PVT1-201ENST00000504719 M6PRP20645 277 aa18.18■□□□□ 0.5
PVT1-201ENST00000504719 ATP6V0CP27449 155 aa18.18■□□□□ 0.5
PVT1-201ENST00000504719 PDE6HQ13956 83 aa18.18■□□□□ 0.5
PVT1-201ENST00000504719 TMEM189A5PLL7 270 aa18.17■□□□□ 0.5
PVT1-201ENST00000504719 OR7C2O60412 319 aa18.17■□□□□ 0.5
PVT1-201ENST00000504719 OR10J4P0C629 311 aa18.17■□□□□ 0.5
PVT1-201ENST00000504719 RAB2AP61019 212 aa18.17■□□□□ 0.5
PVT1-201ENST00000504719 RPL7L1Q6DKI1 246 aaKnown RBP18.17■□□□□ 0.5
PVT1-201ENST00000504719 ZNF767PQ75MW2 155 aa18.17■□□□□ 0.5
PVT1-201ENST00000504719 FXYD5Q96DB9 178 aa18.17■□□□□ 0.5
PVT1-201ENST00000504719 PRAC2D3DTV9 90 aa18.16■□□□□ 0.5
PVT1-201ENST00000504719 EIF3GO75821 320 aaKnown RBP eCLIP18.16■□□□□ 0.5
PVT1-201ENST00000504719 NBEAP1P0C6P0 100 aa18.16■□□□□ 0.5
PVT1-201ENST00000504719 OR2G3Q8NGZ4 309 aa18.16■□□□□ 0.5
PVT1-201ENST00000504719 RNF141Q8WVD5 230 aa18.16■□□□□ 0.5
PVT1-201ENST00000504719 PSMG3Q9BT73 122 aaPredicted RBP18.16■□□□□ 0.5
PVT1-201ENST00000504719 BORCS7-ASMTA0A0B4J1R7 106 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 TAS2R45P59539 299 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 SPINK13Q1W4C9 94 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 KHDC3LQ587J8 217 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 RPP25LQ8N5L8 163 aaKnown RBP18.15■□□□□ 0.5
PVT1-201ENST00000504719 OR10G4Q8NGN3 311 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 OR10G9Q8NGN4 311 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 OR10G7Q8NGN6 311 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 ZNF503Q96F45 646 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 IGF2BP2-AS1Q96M15 143 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 SH3BGRL3Q9H299 93 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 BIRC6Q9NR09 4857 aa18.15■□□□□ 0.5
PVT1-201ENST00000504719 A0A1W2PPV4 95 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 M0R2Z0 102 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 AMBPP02760 352 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 SPART-AS1P0CW21 52 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 FAM122CQ6P4D5 195 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 EXOC3-AS1Q8N2X6 119 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 PPP1R14DQ9NXH3 145 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 VPS13DQ5THJ4 4388 aa18.14■□□□□ 0.49
PVT1-201ENST00000504719 IGHV4-4A0A075B6R2 117 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 DEFB131BA0A096LNP1 70 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 M0R3E3 92 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 HBE1P02100 147 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 EMP1P54849 157 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 Q6ZNX1 250 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 OR11H4Q8NGC9 324 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 OR10J6PQ8NGY7 276 aa18.13■□□□□ 0.49
PVT1-201ENST00000504719 BOLA2-SMG1P6H3BVE0 249 aa18.12■□□□□ 0.49
PVT1-201ENST00000504719 CRXO43186 299 aaPredicted RBP18.12■□□□□ 0.49
PVT1-201ENST00000504719 UBE2L3P68036 154 aaKnown RBP18.12■□□□□ 0.49
PVT1-201ENST00000504719 SERF2P84101 59 aa18.12■□□□□ 0.49
PVT1-201ENST00000504719 GNPNAT1Q96EK6 184 aaPredicted RBP18.12■□□□□ 0.49
PVT1-201ENST00000504719 MRPL53Q96EL3 112 aaKnown RBP18.12■□□□□ 0.49
PVT1-201ENST00000504719 PHYHIPLQ96FC7 376 aa18.12■□□□□ 0.49
PVT1-201ENST00000504719 AAMDCQ9H7C9 122 aa18.12■□□□□ 0.49
PVT1-201ENST00000504719 PRELID1Q9Y255 219 aa18.12■□□□□ 0.49
PVT1-201ENST00000504719 TAAR5O14804 337 aa18.11■□□□□ 0.49
PVT1-201ENST00000504719 ICAM4Q14773 271 aa18.11■□□□□ 0.49
PVT1-201ENST00000504719 DKK2Q9UBU2 259 aa18.11■□□□□ 0.49
PVT1-201ENST00000504719 DNAH6Q9C0G6 4158 aa18.11■□□□□ 0.49
PVT1-201ENST00000504719 LOC102723971A0A1B0GUV8 181 aa18.1■□□□□ 0.49
PVT1-201ENST00000504719 HMSDA8MTL9 139 aa18.1■□□□□ 0.49
PVT1-201ENST00000504719 HMGB3O15347 200 aaKnown RBP18.1■□□□□ 0.49
PVT1-201ENST00000504719 MBP02144 154 aa18.1■□□□□ 0.49
PVT1-201ENST00000504719 RRN3P1Q2M238 152 aa18.1■□□□□ 0.49
PVT1-201ENST00000504719 BAP18Q8IXM2 172 aa18.1■□□□□ 0.49
PVT1-201ENST00000504719 CYTL1Q9NRR1 136 aa18.1■□□□□ 0.49
PVT1-201ENST00000504719 TRAV12-2A0A075B6T6 113 aa18.09■□□□□ 0.49
PVT1-201ENST00000504719 TEX48A0A1B0GUV7 120 aa18.09■□□□□ 0.49
PVT1-201ENST00000504719 INSP01308 110 aa18.09■□□□□ 0.49
PVT1-201ENST00000504719 CDC34P49427 236 aaPredicted RBP18.09■□□□□ 0.49
PVT1-201ENST00000504719 FAM222AQ5U5X8 452 aa18.09■□□□□ 0.49
PVT1-201ENST00000504719 KCNRGQ8N5I3 272 aa18.09■□□□□ 0.49
PVT1-201ENST00000504719 TMEM208Q9BTX3 173 aa18.09■□□□□ 0.49
PVT1-201ENST00000504719 RANP62826 216 aaKnown RBP18.08■□□□□ 0.48
PVT1-201ENST00000504719 ZNF345Q14585 488 aa18.08■□□□□ 0.48
PVT1-201ENST00000504719 PQLC2Q6ZP29 291 aa18.08■□□□□ 0.48
PVT1-201ENST00000504719 ST6GAL2Q96JF0 529 aa18.08■□□□□ 0.48
PVT1-201ENST00000504719 NPIPB6E9PJ23 425 aa18.07■□□□□ 0.48
PVT1-201ENST00000504719 ARPC5LQ9BPX5 153 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms