RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 HAX1O00165 279 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 CCL21O00585 134 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 MPDU1O75352 247 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ELANEP08246 267 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF883P0CG24 379 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 DLX6P56179 175 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ASPHD1Q5U4P2 390 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 SH2D6Q7Z4S9 175 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 OR9G1Q8NH87 305 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNRF2Q8NHG8 242 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 C18orf32Q8TCD1 76 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 VKORC1Q9BQB6 163 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 TXNDC17Q9BRA2 123 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 SIRPDQ9H106 197 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 MAP1LC3AQ9H492 121 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 ABCA12Q86UK0 2595 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 DMXL1Q9Y485 3027 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 IGHV3-64A0A075B6Q5 118 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 OVOL3O00110 214 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 IGHV3-11P01762 117 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 EVI2AP22794 236 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 HBBP68871 147 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 SRSF2Q01130 221 aaKnown RBP2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 KIR3DS1Q14943 382 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 MEIG1Q5JSS6 88 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 MTURNQ8N3F0 131 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 OR5AN1Q8NGI8 311 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 LINC01560Q8TB33 94 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 OR5P3Q8WZ94 311 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 PRELID3AQ96N28 172 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 C1RLQ9NZP8 487 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 TOMM7Q9P0U1 55 aa2.97□□□□□ -1.93
PCDH11X-208ENST00000504220 IGHV1-45A0A0A0MS14 117 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 IGKV1-12A0A0C4DH73 117 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 IGKV1D-12P01611 117 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 SMIM13P0DJ93 91 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 CA7P43166 264 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 NDUFV3P56181 108 aaKnown RBP2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF56Q15929 161 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 MLANAQ16655 118 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 C8orf31Q8N9H6 132 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 IL17DQ8TAD2 202 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 MRAPQ8TCY5 172 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 CLEC7AQ9BXN2 247 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 PKIBQ9C010 78 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 IDI2-AS1Q9NZ38 188 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 IL36BQ9NZH7 164 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 ZNF292O60281 2723 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 MTORP42345 2549 aa2.96□□□□□ -1.93
PCDH11X-208ENST00000504220 EML6Q6ZMW3 1958 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 hDV102S1A0JD36 115 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 COX6CP09669 75 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 GPR183P32249 361 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 CACNG7P62955 275 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 PCOLCEQ15113 449 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 ZNF295-AS1Q8N0V1 137 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 RPP25LQ8N5L8 163 aaKnown RBP2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 ACANP16112 2415 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 A0A087X0K7 114 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 TRAV8-1A0A0A6YYK1 113 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 KBTBD11-OT1A0A1B0GTJ5 212 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 A0A1B0GUT8 65 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 A0A1W2PPM0 123 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A8PA6NJQ4 464 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 NPIPB11E5RHQ5 1161 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 NCR2O95944 276 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A13PP0C7W8 464 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A24PP0C7X0 464 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 LGALS3P17931 250 aaKnown RBP2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 SUMO2P61956 95 aaKnown RBP2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM53AQ6NSI3 398 aaPredicted RBP2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 EXOC3-AS1Q8N2X6 119 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 DYNLRB2Q8TF09 96 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 TMEM171Q8WVE6 324 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 LYZL4Q96KX0 146 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 LINC00479Q96M42 142 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 METTL26Q96S19 204 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 A0A1B0GX51 115 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 FAM90A20PA6NIJ5 464 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 PEX7O00628 323 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 EFNA2O43921 213 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 CECR9P0C854 216 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 PTGDSP41222 190 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 NPC2P61916 151 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 RPS28P62857 69 aaKnown RBP2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 FHL1Q13642 323 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 PRR30Q53SZ7 412 aaPredicted RBP2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 C19orf54Q5BKX5 351 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 IGFL4Q6B9Z1 124 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 Q6ZT83 130 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 Q71RC1 249 aaPredicted RBP2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 C11orf44Q8N8P7 122 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 FDCSPQ8NFU4 85 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 OR10J6PQ8NGY7 276 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 C2orf48Q96LS8 159 aa2.96□□□□□ -1.94
PCDH11X-208ENST00000504220 NBPF19A0A087WUL8 3843 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 BOD1L1Q8NFC6 3051 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 TRAV8-2A0A0B4J237 113 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 LY6G6EA0A0G2JKS1 128 aa2.95□□□□□ -1.94
PCDH11X-208ENST00000504220 A8MZ25 164 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms