RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 BOLA1Q9Y3E2 137 aa12.08□□□□□ -0.48
SCLT1-205ENST00000503401 PRAC2D3DTV9 90 aa12.07□□□□□ -0.48
SCLT1-205ENST00000503401 M0R3E3 92 aa12.07□□□□□ -0.48
SCLT1-205ENST00000503401 UBE2CO00762 179 aa12.07□□□□□ -0.48
SCLT1-205ENST00000503401 CNN1P51911 297 aaKnown RBP12.07□□□□□ -0.48
SCLT1-205ENST00000503401 AKR1C8PQ5T2L2 129 aa12.07□□□□□ -0.48
SCLT1-205ENST00000503401 Q6ZWC4 215 aa12.07□□□□□ -0.48
SCLT1-205ENST00000503401 ZNF253O75346 499 aa12.06□□□□□ -0.48
SCLT1-205ENST00000503401 ARL14EPLP0DKL9 152 aa12.06□□□□□ -0.48
SCLT1-205ENST00000503401 HIST1H1AQ02539 215 aaPredicted RBP12.06□□□□□ -0.48
SCLT1-205ENST00000503401 PDE6HQ13956 83 aa12.06□□□□□ -0.48
SCLT1-205ENST00000503401 ZNF726P1Q15940 193 aa12.06□□□□□ -0.48
SCLT1-205ENST00000503401 OR8A1Q8NGG7 326 aa12.06□□□□□ -0.48
SCLT1-205ENST00000503401 ACTR3CQ9C0K3 210 aaPredicted RBP12.06□□□□□ -0.48
SCLT1-205ENST00000503401 SLC35B3Q9H1N7 401 aa12.06□□□□□ -0.48
SCLT1-205ENST00000503401 PLA2G2EQ9NZK7 142 aa12.06□□□□□ -0.48
SCLT1-205ENST00000503401 STAG3L2P0CL84 134 aa12.05□□□□□ -0.48
SCLT1-205ENST00000503401 STAG3L3P0CL85 134 aa12.05□□□□□ -0.48
SCLT1-205ENST00000503401 RANP62826 216 aaKnown RBP12.05□□□□□ -0.48
SCLT1-205ENST00000503401 PSG9Q00887 426 aa12.05□□□□□ -0.48
SCLT1-205ENST00000503401 ICAM4Q14773 271 aa12.05□□□□□ -0.48
SCLT1-205ENST00000503401 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
SCLT1-205ENST00000503401 XCL2Q9UBD3 114 aa12.05□□□□□ -0.48
SCLT1-205ENST00000503401 DNAH7Q8WXX0 4024 aa12.05□□□□□ -0.48
SCLT1-205ENST00000503401 SPRY2O43597 315 aa12.04□□□□□ -0.48
SCLT1-205ENST00000503401 PQLC2Q6ZP29 291 aa12.04□□□□□ -0.48
SCLT1-205ENST00000503401 RNF183Q96D59 192 aa12.04□□□□□ -0.48
SCLT1-205ENST00000503401 FHITP49789 147 aa12.04□□□□□ -0.48
SCLT1-205ENST00000503401 BAP18Q8IXM2 172 aa12.04□□□□□ -0.48
SCLT1-205ENST00000503401 TMED6Q8WW62 240 aa12.04□□□□□ -0.48
SCLT1-205ENST00000503401 AAMDCQ9H7C9 122 aa12.04□□□□□ -0.48
SCLT1-205ENST00000503401 DUSP14O95147 198 aaKnown RBP12.03□□□□□ -0.48
SCLT1-205ENST00000503401 TPT1P13693 172 aaKnown RBP12.03□□□□□ -0.48
SCLT1-205ENST00000503401 NUTF2P61970 127 aaKnown RBP12.03□□□□□ -0.48
SCLT1-205ENST00000503401 AMTNQ6UX39 209 aa12.03□□□□□ -0.48
SCLT1-205ENST00000503401 Q9H3A6 140 aa12.03□□□□□ -0.48
SCLT1-205ENST00000503401 SEC11BP0C7V7 166 aa12.02□□□□□ -0.49
SCLT1-205ENST00000503401 GCHFRP30047 84 aa12.02□□□□□ -0.49
SCLT1-205ENST00000503401 FGF8P55075 233 aaPredicted RBP12.02□□□□□ -0.49
SCLT1-205ENST00000503401 EIF5AP63241 154 aaKnown RBP12.02□□□□□ -0.49
SCLT1-205ENST00000503401 IQCF2Q8IXL9 164 aa12.02□□□□□ -0.49
SCLT1-205ENST00000503401 STOML3Q8TAV4 291 aa12.02□□□□□ -0.49
SCLT1-205ENST00000503401 CLUHP3Q96NS8 147 aa12.02□□□□□ -0.49
SCLT1-205ENST00000503401 CTXND1A0A1B0GTU2 59 aa12.01□□□□□ -0.49
SCLT1-205ENST00000503401 A8MTW9 85 aa12.01□□□□□ -0.49
SCLT1-205ENST00000503401 M0R2Z0 102 aa12.01□□□□□ -0.49
SCLT1-205ENST00000503401 SPINK13Q1W4C9 94 aa12.01□□□□□ -0.49
SCLT1-205ENST00000503401 CSNK1G2-AS1Q8NCQ2 148 aa12.01□□□□□ -0.49
SCLT1-205ENST00000503401 OR10J6PQ8NGY7 276 aa12.01□□□□□ -0.49
SCLT1-205ENST00000503401 TP53TG1Q9Y2A0 90 aa12.01□□□□□ -0.49
SCLT1-205ENST00000503401 CXorf1O96002 111 aa12□□□□□ -0.49
SCLT1-205ENST00000503401 ERCC8Q13216 396 aa12□□□□□ -0.49
SCLT1-205ENST00000503401 OR11H2Q8NH07 326 aa12□□□□□ -0.49
SCLT1-205ENST00000503401 MRPL53Q96EL3 112 aaKnown RBP12□□□□□ -0.49
SCLT1-205ENST00000503401 TMPRSS5Q9H3S3 457 aa12□□□□□ -0.49
SCLT1-205ENST00000503401 PRELID1Q9Y255 219 aa12□□□□□ -0.49
SCLT1-205ENST00000503401 IGKV2-40A0A087WW87 121 aaPredicted RBP12□□□□□ -0.49
SCLT1-205ENST00000503401 IGKV2D-40P01614 121 aaPredicted RBP12□□□□□ -0.49
SCLT1-205ENST00000503401 RARRES2Q99969 163 aa12□□□□□ -0.49
SCLT1-205ENST00000503401 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
SCLT1-205ENST00000503401 TRAV12-2A0A075B6T6 113 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 MAP1LC3B2A6NCE7 125 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 PGPA6NDG6 321 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 IFITM2Q01629 132 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 SLC51BQ86UW2 128 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 LYPD1Q8N2G4 141 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 FAM213BQ8TBF2 198 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 C1QTNF4Q9BXJ3 329 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 MAP1LC3BQ9GZQ8 125 aa11.99□□□□□ -0.49
SCLT1-205ENST00000503401 UMAD1C9J7I0 102 aa11.98□□□□□ -0.49
SCLT1-205ENST00000503401 CT45A10P0DMU9 189 aa11.98□□□□□ -0.49
SCLT1-205ENST00000503401 OTORQ9NRC9 128 aa11.98□□□□□ -0.49
SCLT1-205ENST00000503401 RPH3ALQ9UNE2 315 aa11.98□□□□□ -0.49
SCLT1-205ENST00000503401 IGHV3OR16-12A0A075B7B8 117 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 A0A1B0GV50 99 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 NPIPB6E9PJ23 425 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 KIR3DS1Q14943 382 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 SUN5Q8TC36 379 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 VGLL1Q99990 258 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 EDA2RQ9HAV5 297 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 TMEM167BQ9NRX6 74 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 J3KRW8 73 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 DEFB4AO15263 64 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 CRXO43186 299 aaPredicted RBP11.97□□□□□ -0.49
SCLT1-205ENST00000503401 CSN1S1P47710 185 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 AGPAT4-IT1Q9H0P7 198 aa11.97□□□□□ -0.49
SCLT1-205ENST00000503401 A0A0J9YWU9 116 aa11.96□□□□□ -0.5
SCLT1-205ENST00000503401 UBE2G2P60604 165 aa11.96□□□□□ -0.5
SCLT1-205ENST00000503401 GNG5P63218 68 aa11.96□□□□□ -0.5
SCLT1-205ENST00000503401 SFT2D1Q8WV19 159 aa11.96□□□□□ -0.5
SCLT1-205ENST00000503401 WWC2-AS2Q96NR7 200 aa11.96□□□□□ -0.5
SCLT1-205ENST00000503401 X6R8D5 127 aa11.96□□□□□ -0.5
SCLT1-205ENST00000503401 ZNF705EA8MWA4 302 aaPredicted RBP11.95□□□□□ -0.5
SCLT1-205ENST00000503401 DIRC3C9JPN6 131 aa11.95□□□□□ -0.5
SCLT1-205ENST00000503401 C1orf158Q8N1D5 194 aa11.95□□□□□ -0.5
SCLT1-205ENST00000503401 CMTM2Q8TAZ6 248 aa11.95□□□□□ -0.5
SCLT1-205ENST00000503401 CSMD3Q7Z407 3707 aa11.95□□□□□ -0.5
SCLT1-205ENST00000503401 GGTLC3B5MD39 225 aa11.94□□□□□ -0.5
SCLT1-205ENST00000503401 SLC25A5P05141 298 aaKnown RBP11.94□□□□□ -0.5
SCLT1-205ENST00000503401 RBMY1A1P0DJD3 496 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms