RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 IGHV7-4-1A0A0J9YVY3 117 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 TRBV6-1A0A0K0K1D8 114 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 ZNF320A2RRD8 509 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 ZNF705GA8MUZ8 300 aaPredicted RBP6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 DIRC3C9JPN6 131 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 CHEK1O14757 476 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 IGKV2D-40P01614 121 aaPredicted RBP6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 RNASE1P07998 156 aaKnown RBP6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 HLA-DMBP28068 263 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 BMI1P35226 326 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 PSG3Q16557 428 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 FAM106AQ4KMX7 169 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 PRNTQ86SH4 94 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 C1QL4Q86Z23 238 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 ZFP82Q8N141 532 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 KLHDC1Q8N7A1 406 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 RNF152Q8N8N0 203 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 BTF3L4Q96K17 158 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 UBE2E2Q96LR5 201 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 IMMP2LQ96T52 175 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 ZNF331Q9NQX6 463 aaPredicted RBP6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 IL36BQ9NZH7 164 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 ZNF492Q9P255 531 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 UFC1Q9Y3C8 167 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 KLF12Q9Y4X4 402 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 SMAD5-AS1Q9Y6J3 95 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 V9GYV3 84 aa6.18□□□□□ -1.42
PDZRN3-212ENST00000498048 TRAV9-1A0A075B6T8 112 aa6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 FBLL1A6NHQ2 334 aaKnown RBP6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 A8MWP6 167 aa6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 GATCO43716 136 aaKnown RBP6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 PFN1P07737 140 aaKnown RBP6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 PRB4P10163 310 aaPredicted RBP6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 FAM231DQ6ZW35 169 aa6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 REC114Q7Z4M0 266 aa6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 MRPL53Q96EL3 112 aaKnown RBP6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 SMR3AQ99954 134 aa6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 PSG8Q9UQ74 426 aa6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 HIVEP2P31629 2446 aa6.17□□□□□ -1.42
PDZRN3-212ENST00000498048 WNK1Q9H4A3 2382 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 LY6G6DO95868 133 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 IGLV2-11P01706 119 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 CT45A10P0DMU9 189 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 TCL1AP56279 114 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 FAM3BP58499 235 aaPredicted RBP6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 HILS1P60008 231 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 TM4SF20Q53R12 229 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 IGFL4Q6B9Z1 124 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 GPHB5Q86YW7 130 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 TMEM183AQ8IXX5 376 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 RNF182Q8N6D2 247 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 ARL6IP6Q8N6S5 226 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 KLHL30-AS1Q8NEE0 82 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 Q8TAT8 98 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 C4orf3Q8WVX3 66 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 C16orf92Q96LL3 132 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 JMJD8Q96S16 334 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 NDFIP1Q9BT67 221 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 RPP21Q9H633 154 aaKnown RBP6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 SRD5A3Q9H8P0 318 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 MTORP42345 2549 aa6.16□□□□□ -1.42
PDZRN3-212ENST00000498048 BAHCC1Q9P281 2608 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 TMEM213A2RRL7 107 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 K7EMT4 169 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 P01737 135 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 TYMSP04818 313 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 EDN2P20800 178 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 HOXD3P31249 432 aaPredicted RBP6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 SYNJ2BPP57105 145 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 RPL19P84098 196 aaKnown RBP6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 DEFB136Q30KP8 78 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 Q71RC1 249 aaPredicted RBP6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 ZNF738Q8NE65 137 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 OR4B1Q8NGF8 309 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 DAZAP1Q96EP5 407 aaKnown RBP6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 ZC2HC1AQ96GY0 325 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 ASCL2Q99929 193 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 MLST8Q9BVC4 326 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 RHPN1-AS1Q9BWJ2 59 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 NRN1Q9NPD7 142 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 CLEC5AQ9NY25 188 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 ZFP30Q9Y2G7 519 aa6.15□□□□□ -1.42
PDZRN3-212ENST00000498048 AGRNO00468 2067 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 IGKV3-7A0A075B6H7 116 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 TRAV8-2A0A0B4J237 113 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 LOC105371267A0A1B0GV96 52 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 ZNF705FA8MVS1 300 aaPredicted RBP6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 LINC01619G3V211 115 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 M0QZ24 198 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 LGALS9O00182 355 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 CA1P00915 261 aaPredicted RBP6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 S100A6P06703 90 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 SLURP1P55000 103 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 RPL11P62913 178 aaKnown RBP6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 FOXL1Q12952 345 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 CT83Q5H943 113 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 SAMD13Q5VXD3 122 aa6.14□□□□□ -1.43
PDZRN3-212ENST00000498048 LCN12Q6JVE5 192 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms