RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 TTC32Q5I0X7 151 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 Q6ZRN7 208 aaPredicted RBP8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 ZNF546Q86UE3 836 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 OR10P1Q8NGE3 313 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 SAT2Q96F10 170 aaPredicted RBP8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 C20orf144Q9BQM9 153 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 SLC50A1Q9BRV3 221 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 SRRQ9GZT4 340 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 MGAT4CQ9UBM8 478 aa8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 MRPS16Q9Y3D3 137 aaKnown RBP8.29□□□□□ -1.08
SHROOM1-206ENST00000495680 COX7A2P2O60397 106 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 TSC22D2O75157 780 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 OR4E1P0C645 316 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 BTF3P20290 206 aaKnown RBP8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 BTCP35070 178 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 LINC00315P59091 139 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 IAH1Q2TAA2 248 aaPredicted RBP8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 CCDC28AQ8IWP9 274 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 ZNF431Q8TF32 576 aaPredicted RBP8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 DEDD2Q8WXF8 326 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 GSKIPQ9P0R6 139 aa8.28□□□□□ -1.08
SHROOM1-206ENST00000495680 A0A096LPF7 62 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 C7orf66A4D0T2 115 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 SNURFLB1AK76 121 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 NPIPB6E9PJ23 425 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 PXDC1Q5TGL8 231 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 BPIFA4PQ86YQ2 179 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 C11orf72Q8NBR9 251 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 GSN-AS1Q9NRJ2 163 aa8.27□□□□□ -1.09
SHROOM1-206ENST00000495680 A0A1W2PPQ1 181 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 H3BNG1 76 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 M0R3E3 92 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 CCSO14618 274 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 MBPP02686 304 aaPredicted RBP8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 S100A5P33763 92 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 TAS2R30P59541 319 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 DAZ2Q13117 558 aaKnown RBP8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 ERCC8Q13216 396 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 C4orf46Q504U0 113 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 C10orf113Q5VZT2 155 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 MIC13Q5XKP0 118 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 S100A7AQ86SG5 101 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 SDHCQ99643 169 aaPredicted RBP8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 TNFRSF18Q9Y5U5 241 aa8.26□□□□□ -1.09
SHROOM1-206ENST00000495680 LEPP41159 167 aa8.25□□□□□ -1.09
SHROOM1-206ENST00000495680 CD300CQ08708 224 aa8.25□□□□□ -1.09
SHROOM1-206ENST00000495680 Q6ZQT7 251 aa8.25□□□□□ -1.09
SHROOM1-206ENST00000495680 ODF3Q96PU9 254 aa8.25□□□□□ -1.09
SHROOM1-206ENST00000495680 PYGO2Q9BRQ0 406 aa8.25□□□□□ -1.09
SHROOM1-206ENST00000495680 KLF12Q9Y4X4 402 aa8.25□□□□□ -1.09
SHROOM1-206ENST00000495680 PXMP4Q9Y6I8 212 aa8.25□□□□□ -1.09
SHROOM1-206ENST00000495680 TRGV1A0A0A0MS02 117 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 CST7O76096 145 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 CAMLGP49069 296 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 BTN1A1Q13410 526 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 NRARPQ7Z6K4 114 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 MITD1Q8WV92 249 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 GGACTQ9BVM4 153 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 C11orf1Q9H5F2 150 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 DNAJC4Q9NNZ3 241 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 RNF24Q9Y225 148 aa8.24□□□□□ -1.09
SHROOM1-206ENST00000495680 TRGV2A0A075B6R0 118 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 C7orf71A4D174 169 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 NAP1L6A6NFF2 107 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 FAM24AA6NFZ4 105 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 CCDC160A6NGH7 325 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 KLLNB2CW77 178 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 ZNF324O75467 553 aaPredicted RBP8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 NDUFB4O95168 129 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 IGHV3-53P01767 116 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 XGP55808 180 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 PRR9Q5T870 116 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 TRIQKQ629K1 86 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 FAM19A4Q96LR4 140 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 C18orf15Q96N68 181 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 RBM38Q9H0Z9 239 aaKnown RBP8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 TP53TG3Q9ULZ0 132 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 FUT9Q9Y231 359 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 WDR83OSQ9Y284 106 aa8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 LSM5Q9Y4Y9 91 aaKnown RBP8.23□□□□□ -1.09
SHROOM1-206ENST00000495680 EPM2AB3EWF7 344 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 SIVA1O15304 175 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 NXPH4O95158 308 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 SLC25A5P05141 298 aaKnown RBP8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 DNAH10OSP0CZ25 163 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 INPP1P49441 399 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 BCAP31P51572 246 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 SPANXN2Q5MJ10 180 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 AGPAT4-IT1Q9H0P7 198 aa8.22□□□□□ -1.09
SHROOM1-206ENST00000495680 DMBT1Q9UGM3 2413 aaPredicted RBP8.21□□□□□ -1.09
SHROOM1-206ENST00000495680 TRBV19A0A075B6N1 114 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 UBE2L5PA0A1B0GUS4 154 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 L7N2F9 121 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 SPINK4O60575 86 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 PYYP10082 97 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 RNASE4P34096 147 aaKnown RBP8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 CAV2P51636 162 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 VAMP2P63027 116 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 GUK1Q16774 197 aa8.21□□□□□ -1.1
SHROOM1-206ENST00000495680 GCSAMLQ5JQS6 135 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms