RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 APOHP02749 345 aaPredicted RBP9.76□□□□□ -0.85
ERCC3-209ENST00000494464 NPPCP23582 126 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 CRYBB3P26998 211 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 CEBPGP53567 150 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 PAFAH1B2P68402 229 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 Q6ZWC4 215 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 CBLN2Q8IUK8 224 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 KIR2DL5AQ8N109 375 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.76□□□□□ -0.85
ERCC3-209ENST00000494464 KIR2DL5BQ8NHK3 375 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 METTL26Q96S19 204 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 RPS10P5Q9NQ39 176 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 TP53TG1Q9Y2A0 90 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 SACSQ9NZJ4 4579 aa9.76□□□□□ -0.85
ERCC3-209ENST00000494464 YPEL3P61236 119 aaPredicted RBP9.75□□□□□ -0.85
ERCC3-209ENST00000494464 TIGITQ495A1 244 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 TMEM88Q6PEY1 159 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 PATE2Q6UY27 113 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 STXBP6Q8NFX7 210 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 C11orf52Q96A22 123 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 ZNF503Q96F45 646 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 FAM167A-AS1Q96KT0 104 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 OVOL2Q9BRP0 275 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 SLC25A2Q9BXI2 301 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 PARLQ9H300 379 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 MAP6D1Q9H9H5 199 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 NAT8Q9UHE5 227 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 ZNF727A8MUV8 499 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 OR7C2O60412 319 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 HYPMO75409 117 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 TOMM40O96008 361 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 ATP5G3P48201 142 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 TFPI2P48307 235 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 UBE2G2P60604 165 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 ZFAND6Q6FIF0 208 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 IL17DQ8TAD2 202 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 SMIM7Q9BQ49 75 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 SDF2L1Q9HCN8 221 aa9.75□□□□□ -0.85
ERCC3-209ENST00000494464 YTHDF2Q9Y5A9 579 aaKnown RBP9.75□□□□□ -0.85
ERCC3-209ENST00000494464 IGKV3-7A0A075B6H7 116 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 IGHV3-66A0A0C4DH42 116 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 CST9LP1Q5W188 147 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 APRG1Q8IVJ8 170 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 C15orf54Q8N8G6 183 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 Q8WTZ3 238 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 DOK5Q9P104 306 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 TMA7Q9Y2S6 64 aaKnown RBP9.74□□□□□ -0.85
ERCC3-209ENST00000494464 U3KQE9 123 aa9.74□□□□□ -0.85
ERCC3-209ENST00000494464 PSG1P11464 419 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 UBE2L3P68036 154 aaKnown RBP9.73□□□□□ -0.85
ERCC3-209ENST00000494464 DEFB135Q30KP9 77 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 MORN5Q5VZ52 161 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 LINC00305Q7Z4B0 112 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 GBGT1Q8N5D6 347 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 OR1B1Q8NGR6 318 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 RPUSD4Q96CM3 377 aaKnown RBP9.73□□□□□ -0.85
ERCC3-209ENST00000494464 GRAMD2BQ96HH9 432 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 UHRF2Q96PU4 802 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 PRELID1Q9Y255 219 aa9.73□□□□□ -0.85
ERCC3-209ENST00000494464 CXorf65A6NEN9 183 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 SPRY2O43597 315 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 RD3LP0DJH9 198 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 RPL35AP18077 110 aaKnown RBP9.72□□□□□ -0.85
ERCC3-209ENST00000494464 ORM2P19652 201 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 ZNF124Q15973 351 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 TMEM241Q24JQ0 296 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 OR51G1Q8NGK1 321 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 TCEAL7Q9BRU2 100 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 TMEM242Q9NWH2 141 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 HIGD1AQ9Y241 93 aa9.72□□□□□ -0.85
ERCC3-209ENST00000494464 LYSTQ99698 3801 aa9.71□□□□□ -0.85
ERCC3-209ENST00000494464 TRAV5A0A0B4J249 113 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 K7EQG2 157 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 IL4P05112 153 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 AKR1C3P42330 323 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 RPL11P62913 178 aaKnown RBP9.71□□□□□ -0.86
ERCC3-209ENST00000494464 USF2Q15853 346 aaPredicted RBP9.71□□□□□ -0.86
ERCC3-209ENST00000494464 ZNF674Q2M3X9 581 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 C16orf54Q6UWD8 224 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 S100A7AQ86SG5 101 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 DCANP1Q8TF63 244 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 GLMPQ8WWB7 406 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 RNF183Q96D59 192 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 FXYD5Q96DB9 178 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 CTDSP1Q9GZU7 261 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 TMEM14CQ9P0S9 112 aa9.71□□□□□ -0.86
ERCC3-209ENST00000494464 SCO2A0A1W2PP80 73 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 HELTA6NFD8 242 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 COLCA2A8K830 154 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 GGTLC3B5MD39 225 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 H3BRN7 92 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 OR10J4P0C629 311 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 DEFB131AP59861 70 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 LYZP61626 148 aa9.7□□□□□ -0.86
ERCC3-209ENST00000494464 RPL23P62829 140 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms